myRT

myRT report for GCA_013169855.1_ASM1316985v1

Download annotations/find similar RTs

Seq: SWHP01000118.1 Enterobacter chengduensis strain C2-143-1 contig_111_1, whole genome shotgun sequence (2756 bp)
Overview 1 RT 1: 2-2603 bp Neighborhood of RT #1 [2, 2755] AAA_21 RVT-Retrons Feature: gene Location: 2-1777 bp Feature: domain Description: AAA_21 Location: 323-545 bp Feature: domain Description: AAA_21 Location: 323-545 bp Feature: gene Location: 1892-2755 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2075-2603 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2075-2603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_21 (pfam13304)

Seq: SWHP01000044.1 Enterobacter chengduensis strain C2-143-1 contig_41_1, whole genome shotgun sequence (50758 bp)
Overview 1 RT 1: 1-3593 bp Neighborhood of RT #1 [1, 3625] RVT-GII GIIM PHA02517 MFS_arabinose_efflux_permease_like Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2303-2737 bp Feature: domain Description: PHA02517 Location: 2306-2729 bp Feature: domain Description: PHA02 517 Location: 2 306-2 72 9 bp Feature: gene Location: 3041-3625 bp Feature: domain Description: MFS_arabinose_efflux_permease_like Location: 3062-3593 bp Feature: domain Description: MFS_arabinose_efflux_permease_like Location: 3062 -3593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), MFS_arabinose_efflux_permease_like (cd17473), RVT-GII, GIIM (pfam08388)