myRT

myRT report for GCA_013177945.1_ASM1317794v1

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Seq: JABLXW010000015.1 Firmicutes bacterium isolate Ch130 contig15, whole genome shotgun sequence (208490 bp)
Overview 1 RT 1: 90119-94888 bp Neighborhood of RT #1 [90119, 95034] PhdYeFM_antitox IS285 RVT-UG25 HEAT_2 DUF1848 Feature: gene Location: 90119-90424 bp Feature: domain Description: PhdYeFM_antitox Location: 90164-90338 bp Feature: domain Description: PhdYeFM_antitox Location: 901 64-90338 bp Feature: gene Location: 90706-90897 bp Feature: domain Description: IS285 Location: 90712-90886 bp Feature: domain Description: IS285 Location: 9071 2-90886 bp Feature: gene Location: 91457-93235 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 92492-92852 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 92492-92852 bp Feature: gene Location: 93232-93831 bp Feature: domain Description: HEAT_2 Location: 93493-93670 bp Feature: domain Description: HEAT_2 Location: 93493-93670 bp Feature: gene Location: 94033-95034 bp Feature: domain Description: DUF1848 Location: 94090-94888 bp Feature: domain Description: DUF1 848 Location: 94090-94888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), IS285 (COG3328), RVT-UG25, HEAT_2 (pfam13646), DUF1848 (pfam08902)

Seq: JABLXW010000016.1 Firmicutes bacterium isolate Ch130 contig16, whole genome shotgun sequence (114020 bp)
Overview 1 RT 1: 64825-69215 bp Neighborhood of RT #1 [64825, 69298] RVT-GII GIIM metX metW Feature: gene Location: 64825-65022 bp Feature: gene Location: 65482-65991 bp Feature: gene Location: 66079-67347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66289-66910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 662 89-66910 bp Feature: domain Description: GIIM Note: maturase Location: 66952-67186 bp Feature: domain Description: GIIM Note: maturase Location: 66952 -67186 bp Feature: gene Location: 67476-68693 bp Feature: domain Description: metX Location: 67584-68679 bp Feature: domain Description: metX Location: 67584-68679 bp Feature: gene Location: 68690-69298 bp Feature: domain Description: metW Location: 68714-69215 bp Feature: domain Description: metW Location: 68714-692 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), metX (PRK00175), metW (TIGR02081)

Seq: JABLXW010000019.1 Firmicutes bacterium isolate Ch130 contig19, whole genome shotgun sequence (17920 bp)
Overview 1 RT 1: 12723-17608 bp Neighborhood of RT #1 [12723, 17817] UPF0236 RVT-GII GIIM RVT-GII Feature: gene Location: 12723-14150 bp Feature: domain Description: UPF0236 Location: 12804-13965 bp Feature: domain Description: UPF023 6 Location: 12804-13 965 bp Feature: gene Location: 14178-14876 bp Feature: gene Location: 15151-16479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15445-16069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15445-16069 bp Feature: domain Description: GIIM Note: maturase Location: 16171-16378 bp Feature: domain Description: GIIM Note: maturase Location: 16171-163 78 bp Feature: gene Location: 16660-17817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16915-17608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16915-17608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0236 (pfam06782), RVT-GII, GIIM (pfam08388)

Seq: JABLXW010000003.1 Firmicutes bacterium isolate Ch130 contig3, whole genome shotgun sequence (170952 bp)
Overview 1 RT 1: 124248-128401 bp Neighborhood of RT #1 [124248, 128508] DDE_Tnp_1_6 RVT-GII group_II_RT_mat DUF1638 Feature: gene Location: 124248-124679 bp Feature: domain Description: DDE_Tnp_1_6 Location: 124476-124665 bp Feature: domain Description: DDE_Tnp_1_6 Location: 124 4 76-124 665 bp Feature: gene Location: 125720-126070 bp Feature: gene Location: 126200-126547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126266-126539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126266-126539 bp Feature: gene Location: 126875-127132 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 126902-127112 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 126902-127112 bp Feature: gene Location: 127798-128508 bp Feature: domain Description: DUF1638 Location: 127891-128401 bp Feature: domain Description: DUF1638 Location: 127891-1284 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), RVT-GII, group_II_RT_mat (TIGR04416), DUF1638 (pfam07796)

Seq: JABLXW010000008.1 Firmicutes bacterium isolate Ch130 contig8, whole genome shotgun sequence (322894 bp)
Overview 1 RT 1: 259608-265497 bp Neighborhood of RT #1 [259608, 265535] TatA Fur_like RVT-GII GIIM RVT-GII GIIM NuoI Feature: gene Location: 259608-259883 bp Feature: domain Description: TatA Location: 259611-259830 bp Feature: domain Description: TatA Location: 25 9611-25 9830 bp Feature: gene Location: 260350-260748 bp Feature: domain Description: Fur_like Location: 260359-260704 bp Feature: domain Description: Fur_like Location: 26035 9-260704 bp Feature: gene Location: 261032-262306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261242-261863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261242-261863 bp Feature: domain Description: GIIM Note: maturase Location: 261905-262139 bp Feature: domain Description: GIIM Note: maturase Location: 261905 -262139 bp Feature: gene Location: 262394-262903 bp Feature: gene Location: 263129-264397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263339-263960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263339-263960 bp Feature: domain Description: GIIM Note: maturase Location: 264002-264236 bp Feature: domain Description: GIIM Note: maturase Location: 264002-264236 bp Feature: gene Location: 264485-264994 bp Feature: gene Location: 265185-265535 bp Feature: domain Description: NuoI Location: 265203-265497 bp Feature: domain Description: NuoI Location: 265 203-265 497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TatA (COG1826), Fur_like (cd07153), RVT-GII, GIIM (pfam08388), NuoI (TIGR01971)