myRT

myRT report for GCA_013178105.1_ASM1317810v1

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Seq: JABLXI010000014.1 Firmicutes bacterium isolate Ch38 contig14, whole genome shotgun sequence (26933 bp)
Overview 1 RT 1: 2-3853 bp Neighborhood of RT #1 [2, 3906] FRQ1 RVT-GII RVT-GII GIIM Cu_amine_oxidN1 DUF5615 Feature: gene Location: 2-991 bp Feature: domain Description: FRQ1 Location: 125-281 bp Feature: domain Description: FRQ1 Location: 1 25-281 bp Feature: gene Location: 1289-1420 bp Feature: gene Location: 1494-2024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1818-2013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 8-201 3 bp Feature: gene Location: 2059-2865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2062-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2062-2425 bp Feature: domain Description: GIIM Note: maturase Location: 2476-2701 bp Feature: domain Description: GIIM Note: maturase Location: 2476-2701 bp Feature: gene Location: 3037-3744 bp Feature: domain Description: Cu_amine_oxidN1 Location: 3136-3307 bp Feature: domain Description: Cu_amine_oxidN1 Location: 31 36-3307 bp Feature: gene Location: 3748-3906 bp Feature: domain Description: DUF5615 Location: 3760-3853 bp Feature: domain Description: DUF561 5 Location: 3760-3853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FRQ1 (COG5126), RVT-GII, GIIM (pfam08388), Cu_amine_oxidN1 (pfam07833), DUF5615 (pfam18480)

Seq: JABLXI010000037.1 Firmicutes bacterium isolate Ch38 contig37, whole genome shotgun sequence (6964 bp)
Overview 1 RT 1: 1080-5946 bp Neighborhood of RT #1 [1080, 5993] ParE_toxin group_II_RT_mat RVT-UG13 TerB_N Lhr Feature: gene Location: 1080-1400 bp Feature: domain Description: ParE_toxin Location: 1104-1386 bp Feature: domain Description: ParE_toxin Location: 1104-1386 bp Feature: gene Location: 1729-1887 bp Feature: gene Location: 2017-3834 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2134-2344 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 134-2 344 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 2401-2881 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 2 401-2 881 bp Feature: gene Location: 3901-5133 bp Feature: domain Description: TerB_N Location: 3964-4513 bp Feature: domain Description: TerB_N Location: 3964-4513 bp Feature: gene Location: 5088-5993 bp Feature: domain Description: Lhr Location: 5094-5946 bp Feature: domain Description: Lhr Location: 5094-5946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), group_II_RT_mat (TIGR04416), RVT-UG13, TerB_N (pfam13208), Lhr (COG1201)

Seq: JABLXI010000005.1 Firmicutes bacterium isolate Ch38 contig5, whole genome shotgun sequence (403028 bp)
Overview 1 RT 1: 398354-401515 bp Neighborhood of RT #1 [398354, 401515] RVT-GII GIIM Feature: gene Location: 398354-398959 bp Feature: gene Location: 398971-399156 bp Feature: gene Location: 399650-400918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 399905-400595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 99905-400595 bp Feature: domain Description: GIIM Note: maturase Location: 400664-400877 bp Feature: domain Description: GIIM Note: maturase Location: 400664-400877 bp Feature: gene Location: 400933-401199 bp Feature: gene Location: 401246-401515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)