myRT

myRT report for GCA_013180385.1_ASM1318038v1

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Seq: PYWQ01000001.1 Klebsiella pneumoniae subsp. pneumoniae strain D8 KpUFPRD8_1, whole genome shotgun sequence (5321035 bp)
Overview 1 RT 1: 1506561-1512959 bp 2 RT 2: 1922829-1926078 bp 3 RT 3: 2266795-2270903 bp 4 RT 4: 2400871-2404697 bp 5 RT 5: 3756663-3761238 bp 6 RT 6: 4633744-4637780 bp Neighborhood of RT #1 [1506561, 1513060] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1922829, 1926470] YbjK int RVT-GII Neighborhood of RT #3 [2266795, 2270905] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2400871, 2404699] Rve RVT-GII PRK10276 umuC Neighborhood of RT #5 [3756663, 3761238] YccC PRK10016 RVT-GII Neighborhood of RT #6 [4633744, 4638634] DinI RVT-GII Phage_GPA Feature: gene Location: 1506561-1509548 bp Feature: gene Location: 1509552-1510283 bp Feature: domain Description: Laminin_G_3 Location: 1509873-1510227 bp Feature: domain Description: Laminin_G_3 Location: 1 509873-1 51 0227 bp Feature: gene Location: 1510939-1512426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1511344-1512034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 1 344-1 51 2034 bp Feature: gene Location: 1512516-1512695 bp Feature: gene Location: 1512743-1513060 bp Feature: domain Description: PRK10276 Location: 1512749-1512863 bp Feature: domain Description: PRK1 0276 Location: 1 51 2749-1 51 2863 bp Feature: domain Description: PRK10276 Location: 1512890-1512959 bp Feature: domain Description: PRK1 0276 Location: 1 51 2890-1 51 2959 bp Feature: gene Location: 1922829-1923392 bp Feature: domain Description: YbjK Location: 1922835-1923372 bp Feature: domain Description: YbjK Location: 1 922835-1 923372 bp Feature: gene Location: 1923515-1924567 bp Feature: domain Description: int Location: 1923518-1924517 bp Feature: domain Description: int Location: 1 92351 8-1 92451 7 bp Feature: gene Location: 1924983-1926470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1925388-1926078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 925388-1 926078 bp Feature: gene Location: 2266795-2267037 bp Feature: domain Description: DinI Location: 2266846-2267026 bp Feature: domain Description: DinI Location: 2266846-2267026 bp Feature: gene Location: 2267052-2267198 bp Feature: gene Location: 2267652-2269139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2268057-2268747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2268057-2268747 bp Feature: gene Location: 2269218-2269637 bp Feature: domain Description: PRK10276 Location: 2269221-2269632 bp Feature: domain Description: PRK1 0276 Location: 2269221 -2269632 bp Feature: gene Location: 2269640-2270905 bp Feature: domain Description: umuC Location: 2269643-2270903 bp Feature: domain Description: umuC Location: 2269643-2270903 bp Feature: gene Location: 2400871-2401065 bp Feature: gene Location: 2401272-2401988 bp Feature: domain Description: Rve Location: 2401287-2401932 bp Feature: domain Description: Rve Location: 2401 287-2401 932 bp Feature: gene Location: 2402028-2402933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2402043-2402541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2402043-2402541 bp Feature: gene Location: 2403013-2403432 bp Feature: domain Description: PRK10276 Location: 2403016-2403427 bp Feature: domain Description: PRK1 0276 Location: 240301 6-2403427 bp Feature: gene Location: 2403434-2404699 bp Feature: domain Description: umuC Location: 2403437-2404697 bp Feature: domain Description: umuC Location: 2403437-2404697 bp Feature: gene Location: 3756663-3757721 bp Feature: domain Description: YccC Location: 3756669-3757707 bp Feature: domain Description: YccC Location: 3756669-3757707 bp Feature: gene Location: 3757820-3758293 bp Feature: domain Description: PRK10016 Location: 3757823-3758282 bp Feature: domain Description: PRK1 001 6 Location: 3757823-3758282 bp Feature: gene Location: 3758375-3759859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3758777-3759467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3758777-3759467 bp Feature: gene Location: 3759868-3760035 bp Feature: gene Location: 3761062-3761238 bp Feature: gene Location: 4633744-4633977 bp Feature: domain Description: DinI Location: 4633789-4633972 bp Feature: domain Description: DinI Location: 4633789-4633972 bp Feature: gene Location: 4633989-4634177 bp Feature: gene Location: 4634285-4635769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4634687-4635377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4634687-4635377 bp Feature: gene Location: 4635778-4635945 bp Feature: gene Location: 4636250-4638634 bp Feature: domain Description: Phage_GPA Location: 4636814-4637780 bp Feature: domain Description: Phage_GPA Location: 463681 4-4637780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), DinI (pfam06183), umuC (PRK03609), Rve (COG3316), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
Phage_GPA (pfam05840)

Seq: PYWQ01000030.1 Klebsiella pneumoniae subsp. pneumoniae strain D8 KpUFPRD8_30, whole genome shotgun sequence (34425 bp)
Overview 1 RT 1: 6137-11161 bp Neighborhood of RT #1 [6137, 11161] RVT-GII HTH_28 rve Feature: gene Location: 6137-6646 bp Feature: gene Location: 6655-7470 bp Feature: gene Location: 7405-8892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7810-8500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7810-8500 bp Feature: gene Location: 9085-10488 bp Feature: domain Description: HTH_28 Location: 9133-9274 bp Feature: domain Description: HTH_2 8 Location: 9133-92 74 bp Feature: domain Description: rve Location: 9514-9880 bp Feature: domain Description: rve Location: 9514-9880 bp Feature: gene Location: 10517-11161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_28 (pfam13518), rve (pfam00665)

Seq: PYWQ01000004.1 Klebsiella pneumoniae subsp. pneumoniae strain D8 KpUFPRD8_4, whole genome shotgun sequence (1515 bp)
Overview 1 RT 1: 3-1514 bp Neighborhood of RT #1 [3, 1514] RVT-GII Feature: gene Location: 3-1166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1095 bp Feature: gene Location: 1323-1514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWQ01000049.1 Klebsiella pneumoniae subsp. pneumoniae strain D8 KpUFPRD8_49, whole genome shotgun sequence (16311 bp)
Overview 1 RT 1: 9781-13529 bp Neighborhood of RT #1 [9781, 13534] InsE PHA02517 RVT-GII GIIM PHA02517 IS5 Feature: gene Location: 9781-10086 bp Feature: domain Description: InsE Location: 9790-10060 bp Feature: domain Description: InsE Location: 9790-10060 bp Feature: gene Location: 10134-10484 bp Feature: domain Description: PHA02517 Location: 10173-10467 bp Feature: domain Description: PHA02517 Location: 10173-104 67 bp Feature: gene Location: 11127-12647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11400-12129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114 00-12129 bp Feature: domain Description: GIIM Note: maturase Location: 12201-12402 bp Feature: domain Description: GIIM Note: maturase Location: 12201-124 02 bp Feature: gene Location: 12776-13195 bp Feature: domain Description: PHA02517 Location: 12779-13190 bp Feature: domain Description: PHA02517 Location: 12779-13190 bp Feature: gene Location: 13214-13534 bp Feature: domain Description: IS5 Location: 13229-13529 bp Feature: domain Description: IS5 Location: 13229-13529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), IS5 (COG3039), InsE (COG2963)

Seq: PYWQ01000006.1 Klebsiella pneumoniae subsp. pneumoniae strain D8 KpUFPRD8_6, whole genome shotgun sequence (951 bp)
Overview 1 RT 1: 3-501 bp Neighborhood of RT #1 [3, 893] RVT-GII Feature: gene Location: 3-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-5 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWQ01000084.1 Klebsiella pneumoniae subsp. pneumoniae strain D8 KpUFPRD8_84, whole genome shotgun sequence (1031 bp)
Overview 1 RT 1: 2-1030 bp Neighborhood of RT #1 [2, 1030] RVT-GII Feature: gene Location: 2-682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-6 83 bp Feature: gene Location: 839-1030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII