myRT

myRT report for GCA_013180435.1_ASM1318043v1

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Seq: PYWR01000001.1 Klebsiella pneumoniae subsp. pneumoniae strain C9 KpUFPRC9_1, whole genome shotgun sequence (5222604 bp)
Overview 1 RT 1: 1903362-1909833 bp 2 RT 2: 3008855-3012506 bp 3 RT 3: 3089010-3093576 bp 4 RT 4: 3250396-3254249 bp 5 RT 5: 3590305-3593210 bp 6 RT 6: 3956470-3960423 bp Neighborhood of RT #1 [1903362, 1909847] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3008855, 3012562] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #3 [3089010, 3093632] umuC PRK10276 RVT-GII PinE Rve Neighborhood of RT #4 [3250396, 3254249] umuC PRK10276 RVT-GII Neighborhood of RT #5 [3590305, 3593260] RVT-GII int Neighborhood of RT #6 [3956470, 3960423] RVT-GII IS5 Feature: gene Location: 1903362-1904786 bp Feature: domain Description: SbcB Location: 1903368-1904784 bp Feature: domain Description: SbcB Location: 1 903368-1 904784 bp Feature: gene Location: 1904961-1906130 bp Feature: domain Description: dacD Location: 1904970-1906125 bp Feature: domain Description: dacD Location: 1 904970-1 9061 25 bp Feature: gene Location: 1906648-1908135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1907053-1907743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 907053-1 907743 bp Feature: gene Location: 1908217-1908690 bp Feature: domain Description: PRK10016 Location: 1908220-1908679 bp Feature: domain Description: PRK1 001 6 Location: 1 908220-1 908679 bp Feature: gene Location: 1908774-1909847 bp Feature: domain Description: YccC Location: 1908795-1909833 bp Feature: domain Description: YccC Location: 1 908795-1 909833 bp Feature: gene Location: 3008855-3009103 bp Feature: domain Description: PRK10597 Location: 3008858-3009098 bp Feature: domain Description: PRK1 0597 Location: 3008858-3009098 bp Feature: gene Location: 3009419-3009628 bp Feature: gene Location: 3009688-3011172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3010090-3010780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 0090-301 0780 bp Feature: gene Location: 3011181-3011348 bp Feature: gene Location: 3011831-3012562 bp Feature: domain Description: Laminin_G_3 Location: 3012167-3012506 bp Feature: domain Description: Laminin_G_3 Location: 301 21 67-301 2506 bp Feature: gene Location: 3089010-3090275 bp Feature: domain Description: umuC Location: 3089013-3090273 bp Feature: domain Description: umuC Location: 308901 3-3090273 bp Feature: gene Location: 3090277-3090696 bp Feature: domain Description: PRK10276 Location: 3090280-3090691 bp Feature: domain Description: PRK1 0276 Location: 3090280-3090691 bp Feature: gene Location: 3090776-3091786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3090782-3091394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3090782-3091 394 bp Feature: gene Location: 3092401-3092910 bp Feature: domain Description: PinE Location: 3092449-3092902 bp Feature: domain Description: PinE Location: 3092449-3092902 bp Feature: gene Location: 3092916-3093632 bp Feature: domain Description: Rve Location: 3092931-3093576 bp Feature: domain Description: Rve Location: 3092931 -3093576 bp Feature: gene Location: 3250396-3251661 bp Feature: domain Description: umuC Location: 3250399-3251659 bp Feature: domain Description: umuC Location: 3250399-3251 659 bp Feature: gene Location: 3251664-3252083 bp Feature: domain Description: PRK10276 Location: 3251667-3252078 bp Feature: domain Description: PRK1 0276 Location: 3251 667-3252078 bp Feature: gene Location: 3252162-3253646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3252564-3253254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3252564-3253254 bp Feature: gene Location: 3253655-3253822 bp Feature: gene Location: 3254103-3254249 bp Feature: gene Location: 3590305-3591789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3590707-3591397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3590707-3591 397 bp Feature: gene Location: 3591798-3591965 bp Feature: gene Location: 3592208-3593260 bp Feature: domain Description: int Location: 3592211-3593210 bp Feature: domain Description: int Location: 359221 1 -359321 0 bp Feature: gene Location: 3956470-3956736 bp Feature: gene Location: 3956748-3956987 bp Feature: gene Location: 3957065-3958075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3957071-3957683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3957071 -3957683 bp Feature: gene Location: 3958341-3959273 bp Feature: domain Description: IS5 Location: 3958500-3959259 bp Feature: domain Description: IS5 Location: 3958500-3959259 bp Feature: gene Location: 3959677-3960423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10597 (DNA damage-inducible protein I; Provisional), Laminin_G_3 (pfam13385), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PinE (COG1961)
Rve (COG3316), int (PHA02601), IS5 (COG3039)

Seq: PYWR01000017.1 Klebsiella pneumoniae subsp. pneumoniae strain C9 KpUFPRC9_17, whole genome shotgun sequence (210 bp)
Overview 1 RT 1: 3-210 bp Neighborhood of RT #1 [3, 209] RVT-GII Feature: gene Location: 3-209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-2 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWR01000054.1 Klebsiella pneumoniae subsp. pneumoniae strain C9 KpUFPRC9_54, whole genome shotgun sequence (1788 bp)
Overview 1 RT 1: 93-1371 bp Neighborhood of RT #1 [93, 1616] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PYWR01000057.1 Klebsiella pneumoniae subsp. pneumoniae strain C9 KpUFPRC9_57, whole genome shotgun sequence (810 bp)
Overview 1 RT 1: 60-417 bp Neighborhood of RT #1 [60, 809] RVT-GII Feature: gene Location: 60-809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66-417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66-4 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWR01000006.1 Klebsiella pneumoniae subsp. pneumoniae strain C9 KpUFPRC9_6, whole genome shotgun sequence (2288 bp)
Overview 1 RT 1: 60-2287 bp Neighborhood of RT #1 [60, 2287] RVT-GII RVT-GII RVT-GII Feature: gene Location: 60-1289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-5 37 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 540-897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 40-897 bp Feature: gene Location: 1190-1942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1595-1886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 95 -1886 bp Feature: gene Location: 2096-2287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWR01000064.1 Klebsiella pneumoniae subsp. pneumoniae strain C9 KpUFPRC9_64, whole genome shotgun sequence (210 bp)
Overview 1 RT 1: 2-209 bp Neighborhood of RT #1 [2, 208] RVT-GII Feature: gene Location: 2-208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PYWR01000070.1 Klebsiella pneumoniae subsp. pneumoniae strain C9 KpUFPRC9_70, whole genome shotgun sequence (1041 bp)
Overview 1 RT 1: 3-1040 bp Neighborhood of RT #1 [3, 1040] RVT-GII Feature: gene Location: 3-692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-690 bp Feature: gene Location: 849-1040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII