myRT

myRT report for GCA_013180565.1_ASM1318056v1

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Seq: QBUN01000296.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_126, whole genome shotgun sequence (7065 bp)
Overview 1 RT 1: 846-4498 bp Neighborhood of RT #1 [846, 4498] AbrB SplB Radical_SAM RVT-GII GIIM Feature: gene Location: 846-1100 bp Feature: domain Description: AbrB Location: 861-1005 bp Feature: domain Description: AbrB Location: 861 -1 005 bp Feature: gene Location: 1240-2475 bp Feature: domain Description: SplB Location: 1390-2170 bp Feature: domain Description: SplB Location: 1 390-21 70 bp Feature: domain Description: Radical_SAM Location: 2326-2377 bp Feature: domain Description: Radical_SAM Location: 2326-2377 bp Feature: gene Location: 2829-3434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2835-2928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2835-2928 bp Feature: domain Description: GIIM Note: maturase Location: 2982-3213 bp Feature: domain Description: GIIM Note: maturase Location: 2982-321 3 bp Feature: gene Location: 3569-3802 bp Feature: gene Location: 3872-4498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbrB (pfam05145), SplB, Radical_SAM (pfam04055), RVT-GII, GIIM (pfam08388)

Seq: QBUN01000253.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_169, whole genome shotgun sequence (5274 bp)
Overview 1 RT 1: 2-1447 bp Neighborhood of RT #1 [2, 1447] RVT_N RVT-GII Feature: gene Location: 2-943 bp Feature: domain Description: RVT_N Location: 92-335 bp Feature: domain Description: RVT_N Location: 92 -335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380-899 bp Feature: gene Location: 938-1207 bp Feature: gene Location: 1286-1447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: QBUN01000229.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_193, whole genome shotgun sequence (4752 bp)
Overview 1 RT 1: 3-4189 bp Neighborhood of RT #1 [3, 4189] GvpD RVT-GII GIIM Feature: gene Location: 3-1016 bp Feature: domain Description: GvpD Location: 12-498 bp Feature: domain Description: GvpD Location: 12-498 bp Feature: gene Location: 1140-2414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1470-2091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1470-2091 bp Feature: domain Description: GIIM Note: maturase Location: 2130-2328 bp Feature: domain Description: GIIM Note: maturase Location: 213 0-23 28 bp Feature: gene Location: 2569-3033 bp Feature: gene Location: 3200-4189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GvpD (pfam07088), RVT-GII, GIIM (pfam08388)

Seq: QBUN01000200.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_222, whole genome shotgun sequence (4177 bp)
Overview 1 RT 1: 19-4171 bp Neighborhood of RT #1 [19, 4176] RMtype1_S_MmaGORF2198P_TRD1-CR1_like RMtype1_S_MmaGORF2198P_TRD1-CR1_like RVT-AbiP2 HSDR_N COG3943 Feature: gene Location: 19-1305 bp Feature: domain Description: RMtype1_S_MmaGORF2198P_TRD1-CR1_like Location: 328-700 bp Feature: domain Description: RMtype1_S_MmaGORF2198P_TRD1-CR1_like Location: 328-700 bp Feature: domain Description: RMtype1_S_MmaGORF2198P_TRD1-CR1_like Location: 736-1264 bp Feature: domain Description: RMtype1_S_MmaGORF2198P_TRD1-CR1_like Location: 736-1264 bp Feature: gene Location: 1307-2833 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1763-2219 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1763-2219 bp Feature: gene Location: 2837-3166 bp Feature: domain Description: HSDR_N Location: 2849-3113 bp Feature: domain Description: HSDR_N Location: 284 9-3113 bp Feature: gene Location: 3163-4176 bp Feature: domain Description: COG3943 Location: 3199-4171 bp Feature: domain Description: COG394 3 Location: 3199-4 171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_MmaGORF2198P_TRD1-CR1_like (cd17500), RVT-AbiP2, HSDR_N (pfam04313), COG3943 (Uncharacterized conserved protein )

Seq: QBUN01000400.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_27, whole genome shotgun sequence (15480 bp)
Overview 1 RT 1: 316-4073 bp Neighborhood of RT #1 [316, 4073] RVT-GII GIIM rmlA_long Feature: gene Location: 316-450 bp Feature: gene Location: 527-1045 bp Feature: gene Location: 1200-2474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1530-2151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 30-215 1 bp Feature: domain Description: GIIM Note: maturase Location: 2190-2388 bp Feature: domain Description: GIIM Note: maturase Location: 2190-2388 bp Feature: gene Location: 2768-3823 bp Feature: domain Description: rmlA_long Location: 2774-3818 bp Feature: domain Description: rmlA_long Location: 2774-3818 bp Feature: gene Location: 3858-4073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rmlA_long (TIGR01208)

Seq: QBUN01000007.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_420, whole genome shotgun sequence (2038 bp)
Overview 1 RT 1: 3-1407 bp Neighborhood of RT #1 [3, 1511] RVT_N RVT-GII DUF1616 Feature: gene Location: 3-476 bp Feature: domain Description: RVT_N Location: 75-318 bp Feature: domain Description: RVT_N Location: 75-318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36 3-474 bp Feature: gene Location: 463-858 bp Feature: gene Location: 1131-1511 bp Feature: domain Description: DUF1616 Location: 1176-1407 bp Feature: domain Description: DUF16 16 Location: 1176 -1407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, DUF1616 (pfam07760)

Seq: QBUN01000382.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_45, whole genome shotgun sequence (12472 bp)
Overview 1 RT 1: 10147-12306 bp Neighborhood of RT #1 [10147, 12347] RVT-GII Feature: gene Location: 10147-10707 bp Feature: gene Location: 10729-11256 bp Feature: gene Location: 11235-12347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11988-12306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11988-12306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QBUN01000336.1 ANME-1 cluster archaeon GoMg3.2 GOMG3.2_86, whole genome shotgun sequence (9332 bp)
Overview 1 RT 1: 3-1776 bp Neighborhood of RT #1 [3, 1776] RVT_N RVT-GII Feature: gene Location: 3-962 bp Feature: domain Description: RVT_N Location: 93-333 bp Feature: domain Description: RVT_N Location: 93-333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38 4-900 bp Feature: gene Location: 1231-1515 bp Feature: gene Location: 1600-1776 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII