myRT

myRT report for GCA_013186055.1_ASM1318605v1

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Seq: SWXA01000009.1 Cronobacter sakazakii strain CE75 scaffold2, whole genome shotgun sequence (678955 bp)
Overview 1 RT 1: 161423-166350 bp Neighborhood of RT #1 [161423, 166370] Phage_integrase umuC RVT_N RVT-GII GIIM HNHc PRK10276 Feature: gene Location: 161423-162214 bp Feature: domain Description: Phage_integrase Location: 161546-162119 bp Feature: domain Description: Phage_integrase Location: 1 61 546-1 621 1 9 bp Feature: gene Location: 162242-163516 bp Feature: domain Description: umuC Location: 162245-163505 bp Feature: domain Description: umuC Location: 1 62245-1 63505 bp Feature: gene Location: 163916-165631 bp Feature: RT Description: RVT_N Location: 163970-164213 bp Feature: RT Description: RVT_N Location: 1 63970-1 6421 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164258-164909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 64258-1 64909 bp Feature: domain Description: GIIM Note: maturase Location: 164963-165194 bp Feature: domain Description: GIIM Note: maturase Location: 1 64963-1 651 94 bp Feature: domain Description: HNHc Note: nucleases Location: 165428-165584 bp Feature: domain Description: HNHc Note: nucleases Location: 1 65428-1 65584 bp Feature: gene Location: 165996-166166 bp Feature: gene Location: 166221-166370 bp Feature: domain Description: PRK10276 Location: 166248-166350 bp Feature: domain Description: PRK1 0276 Location: 1 66248-1 66350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), umuC (PRK03609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)