myRT

myRT report for GCA_013186515.1_ASM1318651v1

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Seq: JABMIO010000179.1 Escherichia coli strain MCE7 NODE_23_length_60587_cov_47.4209, whole genome shotgun sequence (60587 bp)
Overview 1 RT 1: 56220-60510 bp Neighborhood of RT #1 [56220, 60584] AAA_15 RVT-Retrons Feature: gene Location: 56220-56525 bp Feature: gene Location: 57408-59684 bp Feature: domain Description: AAA_15 Location: 57441-58449 bp Feature: domain Description: AAA_1 5 Location: 57441 -58449 bp Feature: gene Location: 59799-60584 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59982-60510 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59982-6051 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons

Seq: JABMIO010000150.1 Escherichia coli strain MCE7 NODE_52_length_24803_cov_43.7993, whole genome shotgun sequence (24803 bp)
Overview 1 RT 1: 20752-23838 bp Neighborhood of RT #1 [20752, 23879] RVT-Retrons Arm-DNA-bind_3 Feature: gene Location: 20752-20901 bp Feature: gene Location: 21202-22188 bp Feature: gene Location: 22190-23122 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22292-22886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 2 92 -2 2 886 bp Feature: gene Location: 23148-23393 bp Feature: gene Location: 23577-23879 bp Feature: domain Description: Arm-DNA-bind_3 Location: 23586-23838 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 3586-2 3838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_3 (pfam13356)

Seq: JABMIO010000113.1 Escherichia coli strain MCE7 NODE_89_length_2272_cov_217.581, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)