myRT

myRT report for GCA_013186525.1_ASM1318652v1

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Seq: JABMIP010000142.1 Escherichia coli strain MCE8 NODE_11_length_149268_cov_18.9343, whole genome shotgun sequence (149268 bp)
Overview 1 RT 1: 4755-8394 bp Neighborhood of RT #1 [4755, 8561] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 4755-5057 bp Feature: domain Description: InsE Location: 4794-5043 bp Feature: domain Description: InsE Location: 4794-5043 bp Feature: gene Location: 5113-5538 bp Feature: domain Description: PHA02517 Location: 5137-5473 bp Feature: domain Description: PHA0251 7 Location: 51 37-5473 bp Feature: gene Location: 6130-7653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6403-7135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6403-71 35 bp Feature: domain Description: GIIM Note: maturase Location: 7210-7408 bp Feature: domain Description: GIIM Note: maturase Location: 721 0-7408 bp Feature: gene Location: 7848-7982 bp Feature: gene Location: 8148-8561 bp Feature: domain Description: COG2085 Location: 8247-8394 bp Feature: domain Description: COG2085 Location: 8247-8394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: JABMIP010000149.1 Escherichia coli strain MCE8 NODE_4_length_592208_cov_18.7535, whole genome shotgun sequence (592208 bp)
Overview 1 RT 1: 82466-84906 bp Neighborhood of RT #1 [82466, 84906] RVT-Retrons HTH_XRE Feature: gene Location: 82466-82660 bp Feature: gene Location: 82659-83096 bp Feature: gene Location: 83220-84170 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83400-83943 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83400-83943 bp Feature: gene Location: 84148-84468 bp Feature: domain Description: HTH_XRE Location: 84172-84337 bp Feature: domain Description: HTH_XRE Location: 84172 -84337 bp Feature: gene Location: 84493-84906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530)

Seq: JABMIP010000144.1 Escherichia coli strain MCE8 NODE_9_length_181055_cov_18.7043, whole genome shotgun sequence (181055 bp)
Overview 1 RT 1: 130809-133921 bp Neighborhood of RT #1 [130809, 133926] pyrE RVT-Retrons slmA dut Feature: gene Location: 130809-131465 bp Feature: domain Description: pyrE Location: 130827-131460 bp Feature: domain Description: pyrE Location: 13 0827-13 1460 bp Feature: gene Location: 131762-131956 bp Feature: gene Location: 132170-132721 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132173-132446 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 2173 -13 2446 bp Feature: gene Location: 132765-133361 bp Feature: domain Description: slmA Location: 132771-133347 bp Feature: domain Description: slmA Location: 13 2771-13 3 3 47 bp Feature: gene Location: 133468-133926 bp Feature: domain Description: dut Location: 133474-133921 bp Feature: domain Description: dut Location: 13 3 474-13 3 921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)