myRT

myRT report for GCA_013186625.1_ASM1318662v1

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Seq: JABMIN010000203.1 Escherichia coli strain MCE4 NODE_52_length_22176_cov_69.9148, whole genome shotgun sequence (22176 bp)
Overview 1 RT 1: 3565-7906 bp Neighborhood of RT #1 [3565, 7917] InsE PHA02517 RVT-GII GIIM PHA02517 TetR_N TetR_C_28 Feature: gene Location: 3565-3891 bp Feature: domain Description: InsE Location: 3568-3889 bp Feature: domain Description: InsE Location: 3568-3889 bp Feature: gene Location: 3891-4370 bp Feature: domain Description: PHA02517 Location: 3951-4305 bp Feature: domain Description: PHA0251 7 Location: 3951 -4305 bp Feature: gene Location: 4962-6485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5235-5967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5235-5967 bp Feature: domain Description: GIIM Note: maturase Location: 6042-6240 bp Feature: domain Description: GIIM Note: maturase Location: 6042-6240 bp Feature: gene Location: 6662-7048 bp Feature: domain Description: PHA02517 Location: 6665-7046 bp Feature: domain Description: PHA0251 7 Location: 6665-7046 bp Feature: gene Location: 7339-7917 bp Feature: domain Description: TetR_N Location: 7408-7543 bp Feature: domain Description: TetR_N Location: 7408-7543 bp Feature: domain Description: TetR_C_28 Location: 7618-7906 bp Feature: domain Description: TetR_C_28 Location: 761 8-7906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), TetR_N (pfam00440), TetR_C_28 (pfam17937)

Seq: JABMIN010000247.1 Escherichia coli strain MCE4 NODE_8_length_148884_cov_62.1371, whole genome shotgun sequence (148884 bp)
Overview 1 RT 1: 30587-34469 bp Neighborhood of RT #1 [30587, 34474] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 30587-31303 bp Feature: domain Description: rph Location: 30590-31298 bp Feature: domain Description: rph Location: 30590-312 98 bp Feature: gene Location: 31354-32010 bp Feature: domain Description: pyrE Location: 31372-32005 bp Feature: domain Description: pyrE Location: 31372 -32 005 bp Feature: gene Location: 32308-33267 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32443-32992 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 443-32 992 bp Feature: gene Location: 33313-33909 bp Feature: domain Description: slmA Location: 33319-33895 bp Feature: domain Description: slmA Location: 33319-33895 bp Feature: gene Location: 34016-34474 bp Feature: domain Description: dut Location: 34022-34469 bp Feature: domain Description: dut Location: 3402 2 -34469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)