myRT

myRT report for GCA_013187415.1_ASM1318741v1

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Seq: JABNMV010000117.1 Klebsiella pneumoniae strain A03/05 1-ST405_OXA-48_contig_117, whole genome shotgun sequence (18556 bp)
Overview 1 RT 1: 6405-9589 bp Neighborhood of RT #1 [6405, 9589] PRK10276 RVT-GII Feature: gene Location: 6405-6830 bp Feature: domain Description: PRK10276 Location: 6408-6816 bp Feature: domain Description: PRK1 0276 Location: 6408-681 6 bp Feature: gene Location: 6948-7181 bp Feature: gene Location: 7232-8743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7637-8351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7637-8351 bp Feature: gene Location: 8629-9207 bp Feature: gene Location: 9266-9589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JABNMV010000034.1 Klebsiella pneumoniae strain A03/05 1-ST405_OXA-48_contig_34, whole genome shotgun sequence (179680 bp)
Overview 1 RT 1: 39103-45956 bp Neighborhood of RT #1 [39103, 45973] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 39103-39768 bp Feature: domain Description: INT_P4_C Location: 39208-39766 bp Feature: domain Description: INT_P4_C Location: 392 08-39766 bp Feature: gene Location: 40029-40469 bp Feature: domain Description: Integrase_1 Location: 40035-40251 bp Feature: domain Description: Integrase_1 Location: 40035-402 51 bp Feature: gene Location: 40526-42604 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 40934-41378 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 40934-41378 bp Feature: gene Location: 42604-45213 bp Feature: domain Description: FimD Location: 42661-45202 bp Feature: domain Description: FimD Location: 42 661-452 02 bp Feature: gene Location: 45245-45973 bp Feature: domain Description: FimC Location: 45278-45956 bp Feature: domain Description: FimC Location: 452 78-45956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)