myRT

myRT report for GCA_013187505.1_ASM1318750v1

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Seq: JABMMA010000027.1 Escherichia coli strain L23 scaffold55, whole genome shotgun sequence (217593 bp)
Overview 1 RT 1: 88749-94163 bp 2 RT 2: 111635-117873 bp Neighborhood of RT #1 [88749, 94234] IS285 PHA02517 RVT-GII GIIM PHA02517 T5orf172 Neighborhood of RT #2 [111635, 118010] RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 88749-88877 bp Feature: domain Description: IS285 Location: 88755-88866 bp Feature: domain Description: IS285 Location: 88755-88866 bp Feature: gene Location: 89670-90149 bp Feature: domain Description: PHA02517 Location: 89730-90084 bp Feature: domain Description: PHA0251 7 Location: 89730-90084 bp Feature: gene Location: 90741-92264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91014-91746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 01 4-91 746 bp Feature: domain Description: GIIM Note: maturase Location: 91821-92019 bp Feature: domain Description: GIIM Note: maturase Location: 91 821 -9201 9 bp Feature: gene Location: 92590-92730 bp Feature: domain Description: PHA02517 Location: 92593-92713 bp Feature: domain Description: PHA0251 7 Location: 92593-9271 3 bp Feature: gene Location: 93056-94234 bp Feature: domain Description: T5orf172 Location: 93899-94163 bp Feature: domain Description: T5orf1 72 Location: 93899-941 63 bp Feature: gene Location: 111635-111838 bp Feature: gene Location: 111979-112449 bp Feature: gene Location: 112796-116005 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 113324-113813 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 1 3324-1 1 381 3 bp Feature: domain Description: nitrilase Location: 115319-115916 bp Feature: domain Description: nitrilase Location: 1 1 531 9-1 1 591 6 bp Feature: gene Location: 116300-117103 bp Feature: domain Description: AbiEi_3_N Location: 116333-116594 bp Feature: domain Description: AbiEi_3_N Location: 1 1 6333-1 1 6594 bp Feature: domain Description: AbiEi_3 Location: 116609-117062 bp Feature: domain Description: AbiEi_3 Location: 1 1 6609-1 1 7062 bp Feature: gene Location: 117090-118010 bp Feature: domain Description: AbiEii Location: 117132-117873 bp Feature: domain Description: AbiEii Location: 1 1 71 32-1 1 7873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), T5orf172 (smart00974), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)