myRT

myRT report for GCA_013190225.1_ASM1319022v1

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Seq: JABFOO010000002.1 Escherichia coli strain MSHS 472, whole genome shotgun sequence (1758799 bp)
Overview 1 RT 1: 1038337-1043702 bp Neighborhood of RT #1 [1038337, 1043737] RVT-UG7 PRK09692 proA Feature: gene Location: 1038337-1038477 bp Feature: gene Location: 1038587-1039327 bp Feature: gene Location: 1039324-1040952 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1039732-1040161 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 039732-1 0401 61 bp Feature: gene Location: 1040945-1042129 bp Feature: domain Description: PRK09692 Location: 1040951-1042106 bp Feature: domain Description: PRK09692 Location: 1 040951 -1 0421 06 bp Feature: gene Location: 1042484-1043737 bp Feature: domain Description: proA Location: 1042511-1043702 bp Feature: domain Description: proA Location: 1 04251 1 -1 043702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, PRK09692 (Integrase; provisional), proA (TIGR00407)

Seq: JABFOO010000003.1 Escherichia coli strain MSHS 472, whole genome shotgun sequence (516647 bp)
Overview 1 RT 1: 493127-496829 bp Neighborhood of RT #1 [493127, 496939] InsE PHA02517 RVT-GII GIIM PHA02517 Ogr_Delta Feature: gene Location: 493127-493429 bp Feature: domain Description: InsE Location: 493136-493418 bp Feature: domain Description: InsE Location: 493136-493418 bp Feature: gene Location: 493456-493881 bp Feature: domain Description: PHA02517 Location: 493480-493816 bp Feature: domain Description: PHA02 517 Location: 493480-493816 bp Feature: gene Location: 494473-495996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494746-495478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 494746-495478 bp Feature: domain Description: GIIM Note: maturase Location: 495553-495751 bp Feature: domain Description: GIIM Note: maturase Location: 495553-495751 bp Feature: gene Location: 496161-496565 bp Feature: domain Description: PHA02517 Location: 496164-496554 bp Feature: domain Description: PHA02 517 Location: 496164-496554 bp Feature: gene Location: 496679-496939 bp Feature: domain Description: Ogr_Delta Location: 496688-496829 bp Feature: domain Description: Ogr_Delta Location: 496688-49682 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Ogr_Delta (pfam04606)