myRT

myRT report for GCA_013202185.1_ASM1320218v1

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Seq: JABMSA010000404.1 Planctomycetes bacterium isolate bin.53 k141_3281428, whole genome shotgun sequence (5367 bp)
Overview 1 RT 1: 1286-5142 bp Neighborhood of RT #1 [1286, 5240] rve PRK08181 RVT-GII GIIM Feature: gene Location: 1286-2767 bp Feature: domain Description: rve Location: 1661-2042 bp Feature: domain Description: rve Location: 1 661 -2042 bp Feature: gene Location: 2764-3546 bp Feature: domain Description: PRK08181 Location: 2791-3532 bp Feature: domain Description: PRK081 81 Location: 2791 -3532 bp Feature: gene Location: 3918-5240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4260-4887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4260-4887 bp Feature: domain Description: GIIM Note: maturase Location: 4926-5142 bp Feature: domain Description: GIIM Note: maturase Location: 4926-51 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), PRK08181 (transposase; Validated), RVT-GII, GIIM (pfam08388)

Seq: JABMSA010000775.1 Planctomycetes bacterium isolate bin.53 k141_6700177, whole genome shotgun sequence (3400 bp)
Overview 1 RT 1: 1-2826 bp Neighborhood of RT #1 [1, 3398] HNHc Vsr RVT-UG1 Feature: gene Location: 1-912 bp Feature: domain Description: HNHc Note: nucleases Location: 709-904 bp Feature: domain Description: HNHc Note: nucleases Location: 709-904 bp Feature: gene Location: 915-1415 bp Feature: domain Description: Vsr Location: 918-1317 bp Feature: domain Description: Vsr Location: 918-1317 bp Feature: gene Location: 1707-3398 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2331-2826 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2 331-2 82 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNHc (smart00507), Vsr (pfam03852), RVT-UG1