myRT

myRT report for GCA_013203215.1_ASM1320321v1

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Seq: JABMQO010000232.1 FCB group bacterium isolate bin.287 k141_3503161, whole genome shotgun sequence (3083 bp)
Overview 1 RT 1: 153-2930 bp Neighborhood of RT #1 [153, 2944] RVT_N RVT-GII GIIM COG3943 Feature: gene Location: 153-1628 bp Feature: RT Description: RVT_N Location: 198-432 bp Feature: RT Description: RVT_N Location: 1 98-432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 486-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 486-1 1 46 bp Feature: domain Description: GIIM Note: maturase Location: 1200-1431 bp Feature: domain Description: GIIM Note: maturase Location: 1 200-1 431 bp Feature: gene Location: 1970-2944 bp Feature: domain Description: COG3943 Location: 1979-2930 bp Feature: domain Description: COG3943 Location: 1 979-2930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG3943 (Uncharacterized conserved protein )

Seq: JABMQO010000364.1 FCB group bacterium isolate bin.287 k141_6908029, whole genome shotgun sequence (6190 bp)
Overview 1 RT 1: 586-4646 bp Neighborhood of RT #1 [586, 4687] Avd_like RVT-DGRs Por_Secre_tail infC Feature: gene Location: 586-951 bp Feature: domain Description: Avd_like Location: 601-913 bp Feature: domain Description: Avd_like Location: 601-913 bp Feature: gene Location: 953-1252 bp Feature: gene Location: 1255-2262 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1450-2053 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1450-2 053 bp Feature: gene Location: 2264-3025 bp Feature: domain Description: Por_Secre_tail Location: 2771-3014 bp Feature: domain Description: Por_Secre_tail Location: 2 771-3014 bp Feature: gene Location: 4031-4687 bp Feature: domain Description: infC Location: 4133-4646 bp Feature: domain Description: infC Location: 4133-4646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Por_Secre_tail (TIGR04183), infC (TIGR00168), Avd_like (cd16376)