myRT

myRT report for GCA_013205625.1_ASM1320562v1

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Seq: JABMMJ010000138.1 Bacterium isolate bin.2 k141_1299288, whole genome shotgun sequence (6471 bp)
Overview 1 RT 1: 1-1598 bp Neighborhood of RT #1 [1, 1636] groEL RVT-GII COG4113 Feature: gene Location: 1-492 bp Feature: domain Description: groEL Location: 4-484 bp Feature: domain Description: groEL Location: 4-484 bp Feature: gene Location: 729-1217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741 -822 bp Feature: gene Location: 1214-1378 bp Feature: gene Location: 1394-1636 bp Feature: domain Description: COG4113 Location: 1430-1598 bp Feature: domain Description: COG41 1 3 Location: 1 430-1 598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4113 (Predicted nucleic acid-binding protein, contains PIN domain ), groEL (PRK12852), RVT-GII

Seq: JABMMJ010000412.1 Bacterium isolate bin.2 k141_3561651, whole genome shotgun sequence (2930 bp)
Overview 1 RT 1: 2-2845 bp Neighborhood of RT #1 [2, 2928] RVT-DGRs CLECT_VCBS CLECT_VCBS Feature: gene Location: 2-1321 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 209-803 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 09-803 bp Feature: gene Location: 1363-2928 bp Feature: domain Description: CLECT_VCBS Location: 1819-2182 bp Feature: domain Description: CLECT_VCBS Location: 1819-2 182 bp Feature: domain Description: CLECT_VCBS Location: 2506-2845 bp Feature: domain Description: CLECT_VCBS Location: 2 506-2 845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CLECT_VCBS (cd03603), RVT-DGRs

Seq: JABMMJ010000067.1 Bacterium isolate bin.2 k141_581504, whole genome shotgun sequence (2696 bp)
Overview 1 RT 1: 2-2211 bp Neighborhood of RT #1 [2, 2225] RVT-DGRs HRDC pfam03781 Feature: gene Location: 2-463 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 209-464 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 209-464 bp Feature: gene Location: 460-927 bp Feature: domain Description: HRDC Location: 709-901 bp Feature: domain Description: HRDC Location: 709-901 bp Feature: gene Location: 1071-2225 bp Feature: domain Description: pfam03781 Location: 1422-2211 bp Feature: domain Description: pfam03 781 Location: 1422-2211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs, HRDC (smart00341)

Seq: JABMMJ010000725.1 Bacterium isolate bin.2 k141_5909706, whole genome shotgun sequence (14740 bp)
Overview 1 RT 1: 830-10828 bp Neighborhood of RT #1 [830, 10828] PDDEXK_1 RecB RecB RecB TPR_12 TPR RVT-Retrons Feature: gene Location: 830-3514 bp Feature: domain Description: PDDEXK_1 Location: 2630-3221 bp Feature: domain Description: PDDEXK_1 Location: 2630-3221 bp Feature: gene Location: 3511-6699 bp Feature: domain Description: RecB Location: 3538-3694 bp Feature: domain Description: RecB Location: 3538-3694 bp Feature: domain Description: RecB Location: 3709-5932 bp Feature: domain Description: RecB Location: 3709-5932 bp Feature: domain Description: RecB Location: 6226-6616 bp Feature: domain Description: RecB Location: 6226-6616 bp Feature: gene Location: 6712-9354 bp Feature: domain Description: TPR_12 Location: 7153-7297 bp Feature: domain Description: TPR_12 Location: 7153-7297 bp Feature: domain Description: TPR Location: 7483-7663 bp Feature: domain Description: TPR Location: 74 83-7663 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8410-9154 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84 10-9154 bp Feature: gene Location: 9825-10322 bp Feature: gene Location: 10421-10828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecB (COG4998), TPR_12 (pfam13424), TPR (smart00028), RVT-Retrons, PDDEXK_1 (pfam12705)