myRT

myRT report for GCA_013214165.1_ASM1321416v1

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Seq: JABSSM010000122.1 Shewanella sp. isolate DT_112 DT-Shewanella-1_scaffold_122, whole genome shotgun sequence (7851 bp)
Overview 1 RT 1: 1-2080 bp Neighborhood of RT #1 [1, 2080] RVT-GII SEC-C TPR Feature: gene Location: 1-165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-1 30 bp Feature: gene Location: 328-1683 bp Feature: domain Description: SEC-C Location: 373-415 bp Feature: domain Description: SEC-C Location: 373-41 5 bp Feature: domain Description: TPR Location: 430-1402 bp Feature: domain Description: TPR Location: 430-1 402 bp Feature: gene Location: 1925-2080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SEC-C (pfam02810), TPR (smart00028)

Seq: JABSSM010000020.1 Shewanella sp. isolate DT_112 DT-Shewanella-1_scaffold_20, whole genome shotgun sequence (134464 bp)
Overview 1 RT 1: 43195-46362 bp Neighborhood of RT #1 [43195, 46362] RVT-GII Feature: gene Location: 43195-43371 bp Feature: gene Location: 43435-43977 bp Feature: gene Location: 44100-45233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44199-44868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44199-44868 bp Feature: gene Location: 45396-45938 bp Feature: gene Location: 46180-46362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABSSM010000023.1 Shewanella sp. isolate DT_112 DT-Shewanella-1_scaffold_23, whole genome shotgun sequence (79765 bp)
Overview 1 RT 1: 62603-67537 bp Neighborhood of RT #1 [62603, 67537] PhrB RAYT RAYT RVT-GII GIIM COG4764 Feature: gene Location: 62603-64030 bp Feature: domain Description: PhrB Location: 62618-64004 bp Feature: domain Description: PhrB Location: 62618-64004 bp Feature: gene Location: 64264-65244 bp Feature: domain Description: RAYT Location: 64432-64501 bp Feature: domain Description: RAYT Location: 6443 2-64501 bp Feature: domain Description: RAYT Location: 64636-64870 bp Feature: domain Description: RAYT Location: 6463 6-64870 bp Feature: gene Location: 65412-66038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65418-65529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65418-65529 bp Feature: domain Description: GIIM Note: maturase Location: 65589-65814 bp Feature: domain Description: GIIM Note: maturase Location: 65589-65814 bp Feature: gene Location: 66361-66993 bp Feature: domain Description: COG4764 Location: 66406-66952 bp Feature: domain Description: COG4764 Location: 66406-66952 bp Feature: gene Location: 67115-67537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhrB (COG0415), RAYT (COG1943), RVT-GII, GIIM (pfam08388), COG4764 (Uncharacterized protein )