myRT

myRT report for GCA_013214175.1_ASM1321417v1

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Seq: JABSPA010000010.1 Colwellia sp. isolate DT_22 DT-Colwellia-6_scaffold_10, whole genome shotgun sequence (151919 bp)
Overview 1 RT 1: 16955-22417 bp Neighborhood of RT #1 [16955, 22545] HTH_XRE COG2932 AAA RVT-UG12 YjbM PulG Feature: gene Location: 16955-17635 bp Feature: domain Description: HTH_XRE Location: 16970-17075 bp Feature: domain Description: HTH_XRE Location: 1 6970-1 7075 bp Feature: domain Description: COG2932 Location: 17240-17627 bp Feature: domain Description: COG2932 Location: 1 7240-1 7627 bp Feature: gene Location: 17828-18256 bp Feature: domain Description: AAA Location: 17840-17966 bp Feature: domain Description: AAA Location: 1 7840-1 7966 bp Feature: gene Location: 18364-19932 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 18700-19138 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 8700-1 91 38 bp Feature: gene Location: 20084-21577 bp Feature: domain Description: YjbM Location: 20279-20912 bp Feature: domain Description: YjbM Location: 20279-2091 2 bp Feature: gene Location: 22033-22545 bp Feature: domain Description: PulG Location: 22036-22417 bp Feature: domain Description: PulG Location: 22036-2241 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), COG2932 (Phage repressor protein C, contains Cro/C1-type HTH and peptidase s24 domains ), AAA (TIGR00769), RVT-UG12, YjbM (COG2357), PulG (pfam11773)

Seq: JABSPA010000005.1 Colwellia sp. isolate DT_22 DT-Colwellia-6_scaffold_5, whole genome shotgun sequence (366459 bp)
Overview 1 RT 1: 290151-299107 bp Neighborhood of RT #1 [290151, 299107] YbjD YbjD DEXQc_UvrD RVT-Retrons YceH Feature: gene Location: 290151-292304 bp Feature: domain Description: YbjD Location: 290154-290823 bp Feature: domain Description: YbjD Location: 2 90154-2 9082 3 bp Feature: domain Description: YbjD Location: 290976-291597 bp Feature: domain Description: YbjD Location: 2 90976-2 91597 bp Feature: gene Location: 292375-294534 bp Feature: domain Description: DEXQc_UvrD Location: 292438-293293 bp Feature: domain Description: DEXQc_UvrD Location: 2 92 438-2 932 93 bp Feature: gene Location: 294620-296473 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 294755-295472 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 94755-2 95472 bp Feature: gene Location: 297072-297737 bp Feature: domain Description: YceH Location: 297081-297717 bp Feature: domain Description: YceH Location: 2 97081-2 97717 bp Feature: gene Location: 297929-299107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), DEXQc_UvrD (cd17932), RVT-Retrons, YceH (COG3132)