myRT

myRT report for GCA_013214275.1_ASM1321427v1

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Seq: JABSPP010000144.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_144, whole genome shotgun sequence (5204 bp)
Overview 1 RT 1: 2660-5054 bp Neighborhood of RT #1 [2660, 5054] HTH_XRE RVT-UG2 Feature: gene Location: 2660-2884 bp Feature: domain Description: HTH_XRE Location: 2696-2864 bp Feature: domain Description: HTH_XRE Location: 2696-2864 bp Feature: gene Location: 2964-3170 bp Feature: gene Location: 3678-4820 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3954-4809 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3954-4809 bp Feature: gene Location: 4833-5054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG2

Seq: JABSPP010000188.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_188, whole genome shotgun sequence (4239 bp)
Overview 1 RT 1: 104-4154 bp Neighborhood of RT #1 [104, 4154] Exo_endo_phos_2 RVT-UNC Feature: gene Location: 104-277 bp Feature: gene Location: 358-2850 bp Feature: domain Description: Exo_endo_phos_2 Location: 376-703 bp Feature: domain Description: Exo_endo_phos_2 Location: 376-703 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1540-2107 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1540-2 107 bp Feature: gene Location: 3126-4154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-AbiA/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: JABSPP010000287.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_287, whole genome shotgun sequence (2676 bp)
Overview 1 RT 1: 250-1480 bp Neighborhood of RT #1 [250, 2673] RVT-CRISPR-like Feature: gene Location: 250-2673 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 961-1480 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 961-1480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: JABSPP010000290.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_290, whole genome shotgun sequence (2656 bp)
Overview 1 RT 1: 3-2654 bp Neighborhood of RT #1 [3, 2654] RVT-GII zf-RVT Feature: gene Location: 3-2279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102-609 bp Feature: domain Description: zf-RVT Location: 1464-1587 bp Feature: domain Description: zf-RVT Location: 14 64 -1587 bp Feature: gene Location: 2346-2654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, zf-RVT (pfam13966)

Seq: JABSPP010000315.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_315, whole genome shotgun sequence (2495 bp)
Overview 1 RT 1: 2-1955 bp Neighborhood of RT #1 [2, 2494] RVT-GII zf-RVT Feature: gene Location: 2-2494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-989 bp Feature: domain Description: zf-RVT Location: 1775-1955 bp Feature: domain Description: zf-RVT Location: 1775 -195 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, zf-RVT (pfam13966)

Seq: JABSPP010000322.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_322, whole genome shotgun sequence (2452 bp)
Overview 1 RT 1: 313-2450 bp Neighborhood of RT #1 [313, 2450] Hypoth_Ymh group_II_RT_mat RVT-GII Feature: gene Location: 313-726 bp Feature: domain Description: Hypoth_Ymh Location: 316-703 bp Feature: domain Description: Hypoth_Ymh Location: 316 -703 bp Feature: gene Location: 931-1464 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 943-1273 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 943-1273 bp Feature: gene Location: 1489-2193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1684-2188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 84-2188 bp Feature: gene Location: 2325-2450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hypoth_Ymh (pfam09509), group_II_RT_mat (TIGR04416), RVT-GII

Seq: JABSPP010000347.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_347, whole genome shotgun sequence (2276 bp)
Overview 1 RT 1: 615-1869 bp Neighborhood of RT #1 [615, 1961] RVT-GII GIIM Feature: gene Location: 615-1961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921-1587 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1869 bp Feature: domain Description: GIIM Note: maturase Location: 167 1-1869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABSPP010000362.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_362, whole genome shotgun sequence (2194 bp)
Overview 1 RT 1: 3-1551 bp Neighborhood of RT #1 [3, 2192] RVT-GII Feature: gene Location: 3-2192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053-1551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053-1551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABSPP010000048.1 Flavobacteriaceae bacterium isolate DT_37 DT-Flavobacteriaceae-6_scaffold_48, whole genome shotgun sequence (8904 bp)
Overview 1 RT 1: 2-3678 bp Neighborhood of RT #1 [2, 3678] RVT-UG7 Feature: gene Location: 2-1465 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 311-725 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 311-725 bp Feature: gene Location: 1904-3493 bp Feature: gene Location: 3532-3678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7