myRT

myRT report for GCA_013214355.1_ASM1321435v1

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Seq: JABSSL010000139.1 Saprospiraceae bacterium isolate DT_111 DT-Saprospiraceae-2_scaffold_139, whole genome shotgun sequence (21514 bp)
Overview 1 RT 1: 5503-10894 bp Neighborhood of RT #1 [5503, 10894] HRDC Avd_like RVT-DGRs Peptidase_C14 pfam03781 Feature: gene Location: 5503-5985 bp Feature: domain Description: HRDC Location: 5722-5914 bp Feature: domain Description: HRDC Location: 5722-591 4 bp Feature: gene Location: 6006-6350 bp Feature: domain Description: Avd_like Location: 6033-6339 bp Feature: domain Description: Avd_like Location: 6033-6339 bp Feature: gene Location: 6326-7336 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6557-7142 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6557-71 42 bp Feature: gene Location: 7788-9638 bp Feature: domain Description: Peptidase_C14 Location: 7869-8346 bp Feature: domain Description: Peptidase_C1 4 Location: 7869-8346 bp Feature: domain Description: pfam03781 Location: 8892-9621 bp Feature: domain Description: pfam03781 Location: 8892-9621 bp Feature: gene Location: 9926-10894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), Avd_like (cd16376), RVT-DGRs, Peptidase_C14 (pfam00656), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: JABSSL010000159.1 Saprospiraceae bacterium isolate DT_111 DT-Saprospiraceae-2_scaffold_159, whole genome shotgun sequence (14038 bp)
Overview 1 RT 1: 69-3181 bp Neighborhood of RT #1 [69, 3181] RVT_N RVT-GII GIIM McrA Feature: gene Location: 69-1832 bp Feature: RT Description: RVT_N Location: 105-351 bp Feature: RT Description: RVT_N Location: 105-351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393-1074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393-1074 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1404 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1404 bp Feature: domain Description: McrA Location: 1485-1794 bp Feature: domain Description: McrA Location: 1485-1794 bp Feature: gene Location: 2390-2626 bp Feature: gene Location: 2867-3181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)