myRT

myRT report for GCA_013214945.1_ASM1321494v1

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Seq: JABSRT010000033.1 Gammaproteobacteria bacterium isolate DT_93 DT-Psychrobiaceae-2_scaffold_34, whole genome shotgun sequence (38187 bp)
Overview 1 RT 1: 87-5743 bp Neighborhood of RT #1 [87, 5760] RVT-GII GIIM PBP2_HisK Feature: gene Location: 87-455 bp Feature: gene Location: 630-1919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885-1554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885-1 554 bp Feature: domain Description: GIIM Note: maturase Location: 1647-1839 bp Feature: domain Description: GIIM Note: maturase Location: 1 647-1 839 bp Feature: gene Location: 3794-3967 bp Feature: gene Location: 4972-5760 bp Feature: domain Description: PBP2_HisK Location: 5074-5743 bp Feature: domain Description: PBP2_HisK Location: 5074-5743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_HisK (cd13704), RVT-GII, GIIM (pfam08388)

Seq: JABSRT010000005.1 Gammaproteobacteria bacterium isolate DT_93 DT-Psychrobiaceae-2_scaffold_6, whole genome shotgun sequence (253006 bp)
Overview 1 RT 1: 43221-49952 bp Neighborhood of RT #1 [43221, 49957] BCCT PRK10696 RVT-GII GIIM PRK12308 Feature: gene Location: 43221-44831 bp Feature: domain Description: BCCT Location: 43314-44814 bp Feature: domain Description: BCCT Location: 43314-44814 bp Feature: gene Location: 44960-45850 bp Feature: domain Description: PRK10696 Location: 44990-45752 bp Feature: domain Description: PRK10696 Location: 44990-45752 bp Feature: gene Location: 45959-47236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46172-46793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46172 -46793 bp Feature: domain Description: GIIM Note: maturase Location: 46838-47060 bp Feature: domain Description: GIIM Note: maturase Location: 46838-47060 bp Feature: gene Location: 47677-47829 bp Feature: gene Location: 48023-49957 bp Feature: domain Description: PRK12308 Location: 48032-49952 bp Feature: domain Description: PRK12 308 Location: 48032 -49952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BCCT (pfam02028), PRK10696 (tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional), RVT-GII, GIIM (pfam08388), PRK12308 (argininosuccinate lyase)