myRT

myRT report for GCA_013214975.1_ASM1321497v1

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Seq: JABSPR010000185.1 Flavobacteriales bacterium isolate DT_39 DT-Flavobacteriales-2_scaffold_185, whole genome shotgun sequence (4212 bp)
Overview 1 RT 1: 297-3519 bp Neighborhood of RT #1 [297, 3740] COG3666 DDE_Tnp_1_6 RimL RVT-GII GIIM Feature: gene Location: 297-1802 bp Feature: domain Description: COG3666 Location: 306-771 bp Feature: domain Description: COG3666 Location: 306-771 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1302-1656 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 302-1 656 bp Feature: gene Location: 1863-2381 bp Feature: domain Description: RimL Location: 1896-2328 bp Feature: domain Description: RimL Location: 1 896-2328 bp Feature: gene Location: 2424-3740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2619-3234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 9-3234 bp Feature: domain Description: GIIM Note: maturase Location: 3306-3519 bp Feature: domain Description: GIIM Note: maturase Location: 3306-351 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, GIIM (pfam08388), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: JABSPR010000270.1 Flavobacteriales bacterium isolate DT_39 DT-Flavobacteriales-2_scaffold_270, whole genome shotgun sequence (2864 bp)
Overview 1 RT 1: 2-2682 bp Neighborhood of RT #1 [2, 2723] InsG RVT-GII GIIM TauE Feature: gene Location: 2-445 bp Feature: domain Description: InsG Location: 197-428 bp Feature: domain Description: InsG Location: 197-42 8 bp Feature: gene Location: 475-1734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 688-1354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 688-1354 bp Feature: domain Description: GIIM Note: maturase Location: 1435-1651 bp Feature: domain Description: GIIM Note: maturase Location: 1435-1651 bp Feature: gene Location: 1833-2723 bp Feature: domain Description: TauE Location: 1971-2682 bp Feature: domain Description: TauE Location: 1971-2 682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TauE (pfam01925), InsG (COG3385), RVT-GII, GIIM (pfam08388)