myRT

myRT report for GCA_013215025.1_ASM1321502v1

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Seq: JABSRR010000105.1 Pseudomonadales bacterium isolate DT_91 DT-Pseudomonadales-2_scaffold_105, whole genome shotgun sequence (6206 bp)
Overview 1 RT 1: 3-1689 bp Neighborhood of RT #1 [3, 1760] RVT-UG4 DinB Acetyltransf_3 Feature: gene Location: 3-485 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 393-483 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 393-483 bp Feature: gene Location: 798-1292 bp Feature: domain Description: DinB Location: 804-1269 bp Feature: domain Description: DinB Location: 804-1 269 bp Feature: gene Location: 1293-1760 bp Feature: domain Description: Acetyltransf_3 Location: 1302-1689 bp Feature: domain Description: Acetyltransf_3 Location: 1 302-1 689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DinB (pfam05163), Acetyltransf_3 (pfam13302)

Seq: JABSRR010000172.1 Pseudomonadales bacterium isolate DT_91 DT-Pseudomonadales-2_scaffold_176, whole genome shotgun sequence (6700 bp)
Overview 1 RT 1: 1299-4535 bp Neighborhood of RT #1 [1299, 4567] RVT-GII HTH_Tnp_1 TnpB_IS66 Feature: gene Location: 1299-1457 bp Feature: gene Location: 2101-2388 bp Feature: gene Location: 2433-3725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2688-3357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 688-3357 bp Feature: gene Location: 3909-4235 bp Feature: domain Description: HTH_Tnp_1 Location: 3957-4062 bp Feature: domain Description: HTH_Tnp_1 Location: 3957-4062 bp Feature: gene Location: 4232-4567 bp Feature: domain Description: TnpB_IS66 Location: 4259-4535 bp Feature: domain Description: TnpB_IS66 Location: 42 59-4535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_Tnp_1 (pfam01527), TnpB_IS66 (pfam05717)

Seq: JABSRR010000228.1 Pseudomonadales bacterium isolate DT_91 DT-Pseudomonadales-2_scaffold_233, whole genome shotgun sequence (3306 bp)
Overview 1 RT 1: 1-3292 bp Neighborhood of RT #1 [1, 3303] PulG RVT-GII GIIM PSD2 Feature: gene Location: 1-387 bp Feature: gene Location: 567-758 bp Feature: domain Description: PulG Location: 678-756 bp Feature: domain Description: PulG Location: 678-756 bp Feature: gene Location: 736-2004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030-1648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 0-1648 bp Feature: domain Description: GIIM Note: maturase Location: 1726-1927 bp Feature: domain Description: GIIM Note: maturase Location: 1726-1927 bp Feature: gene Location: 2011-2667 bp Feature: gene Location: 2950-3303 bp Feature: domain Description: PSD2 Location: 3076-3292 bp Feature: domain Description: PSD2 Location: 3 076-3 292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PulG (pfam11773), RVT-GII, GIIM (pfam08388), PSD2 (pfam07624)

Seq: JABSRR010000267.1 Pseudomonadales bacterium isolate DT_91 DT-Pseudomonadales-2_scaffold_274, whole genome shotgun sequence (2455 bp)
Overview 1 RT 1: 177-2303 bp Neighborhood of RT #1 [177, 2303] RVT-GII GIIM Feature: gene Location: 177-1571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564-1194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 564 -1194 bp Feature: domain Description: GIIM Note: maturase Location: 1248-1464 bp Feature: domain Description: GIIM Note: maturase Location: 124 8-14 64 bp Feature: gene Location: 1604-1960 bp Feature: gene Location: 2172-2303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABSRR010000300.1 Pseudomonadales bacterium isolate DT_91 DT-Pseudomonadales-2_scaffold_310, whole genome shotgun sequence (2047 bp)
Overview 1 RT 1: 288-1513 bp Neighborhood of RT #1 [288, 1863] RVT-GII Feature: gene Location: 288-425 bp Feature: gene Location: 592-1863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 847-15 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII