myRT

myRT report for GCA_013215445.1_ASM1321544v1

Download annotations/find similar RTs

Seq: JABSRA010000155.1 Oceanospirillaceae bacterium isolate DT_74 DT-Nitrincolaceae-2_scaffold_156, whole genome shotgun sequence (4106 bp)
Overview 1 RT 1: 1119-4105 bp Neighborhood of RT #1 [1119, 4105] RVT_N RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 1119-1358 bp Feature: gene Location: 1388-1585 bp Feature: gene Location: 1596-3080 bp Feature: RT Description: RVT_N Location: 1641-1884 bp Feature: RT Description: RVT_N Location: 1 641 -1 884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1929-2553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 929-2553 bp Feature: domain Description: GIIM Note: maturase Location: 2604-2838 bp Feature: domain Description: GIIM Note: maturase Location: 2604-2838 bp Feature: gene Location: 3137-3847 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3233-3698 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3233-3698 bp Feature: gene Location: 3971-4105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: JABSRA010000177.1 Oceanospirillaceae bacterium isolate DT_74 DT-Nitrincolaceae-2_scaffold_178, whole genome shotgun sequence (2183 bp)
Overview 1 RT 1: 538-1636 bp Neighborhood of RT #1 [538, 1827] RVT-GII GIIM Feature: gene Location: 538-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1372 bp Feature: domain Description: GIIM Note: maturase Location: 1423-1636 bp Feature: domain Description: GIIM Note: maturase Location: 142 3-1636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABSRA010000005.1 Oceanospirillaceae bacterium isolate DT_74 DT-Nitrincolaceae-2_scaffold_5, whole genome shotgun sequence (6343 bp)
Overview 1 RT 1: 1-3699 bp Neighborhood of RT #1 [1, 3699] RVT-GII LZ_Tnp_IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 RVT-GII Feature: gene Location: 1-237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-23 5 bp Feature: gene Location: 305-1912 bp Feature: domain Description: LZ_Tnp_IS66 Location: 491-692 bp Feature: domain Description: LZ_Tnp_IS66 Location: 491-692 bp Feature: domain Description: DDE_Tnp_IS66 Location: 908-1763 bp Feature: domain Description: DDE_Tnp_IS66 Location: 908-1763 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1784-1898 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1784-1898 bp Feature: gene Location: 1948-2313 bp Feature: domain Description: TnpB_IS66 Location: 1987-2278 bp Feature: domain Description: TnpB_IS66 Location: 1987-2278 bp Feature: gene Location: 2310-2633 bp Feature: gene Location: 2709-3173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2964-3159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2964-3 159 bp Feature: gene Location: 3227-3436 bp Feature: gene Location: 3454-3699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)