myRT

myRT report for GCA_013215935.1_ASM1321593v1

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Seq: JABSQJ010000176.1 Lentisphaeraceae bacterium isolate DT_57 DT-Lentisphaeraceae-1_scaffold_176, whole genome shotgun sequence (6251 bp)
Overview 1 RT 1: 43-4876 bp Neighborhood of RT #1 [43, 4876] CspC RVT-GII GIIM Feature: gene Location: 43-246 bp Feature: domain Description: CspC Location: 55-241 bp Feature: domain Description: CspC Location: 55-241 bp Feature: gene Location: 1383-2654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1599-2220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 599-2220 bp Feature: domain Description: GIIM Note: maturase Location: 2262-2481 bp Feature: domain Description: GIIM Note: maturase Location: 2262-2481 bp Feature: gene Location: 3132-3437 bp Feature: gene Location: 3455-4876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-GII, GIIM (pfam08388)

Seq: JABSQJ010000494.1 Lentisphaeraceae bacterium isolate DT_57 DT-Lentisphaeraceae-1_scaffold_494, whole genome shotgun sequence (3661 bp)
Overview 1 RT 1: 662-3658 bp Neighborhood of RT #1 [662, 3658] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 662-1045 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 818-932 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 818-932 bp Feature: gene Location: 1057-1992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063-1612 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1918 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1918 bp Feature: gene Location: 2696-3658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: JABSQJ010000701.1 Lentisphaeraceae bacterium isolate DT_57 DT-Lentisphaeraceae-1_scaffold_701, whole genome shotgun sequence (2855 bp)
Overview 1 RT 1: 1050-2847 bp Neighborhood of RT #1 [1050, 2852] RVT-GII GIIM YfmG Feature: gene Location: 1050-2444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1437-2064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 7-2064 bp Feature: domain Description: GIIM Note: maturase Location: 2121-2316 bp Feature: domain Description: GIIM Note: maturase Location: 2121-23 16 bp Feature: gene Location: 2715-2852 bp Feature: domain Description: YfmG Location: 2724-2847 bp Feature: domain Description: YfmG Location: 2724-2847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YfmG (COG1262)