myRT

myRT report for GCA_013216135.1_ASM1321613v1

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Seq: JABSOS010000021.1 Candidatus Caenarcaniphilales bacterium isolate DT_14 DT-Caenarcaniphilales-1_scaffold_21, whole genome shotgun sequence (52051 bp)
Overview 1 RT 1: 37-4594 bp Neighborhood of RT #1 [37, 4602] Resolvase Recombinase Zn_ribbon_recom RVT-UNC TM2 SHOCT Feature: gene Location: 37-1461 bp Feature: domain Description: Resolvase Location: 175-523 bp Feature: domain Description: Resolvase Location: 1 75-523 bp Feature: domain Description: Recombinase Location: 709-946 bp Feature: domain Description: Recombinase Location: 709-946 bp Feature: domain Description: Zn_ribbon_recom Location: 997-1156 bp Feature: domain Description: Zn_ribbon_recom Location: 997-1 1 56 bp Feature: gene Location: 1557-1697 bp Feature: gene Location: 1862-3076 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2231-2825 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2231 -2825 bp Feature: gene Location: 3195-3770 bp Feature: gene Location: 3829-4602 bp Feature: domain Description: TM2 Location: 4261-4477 bp Feature: domain Description: TM2 Location: 4261 -4477 bp Feature: domain Description: SHOCT Location: 4513-4594 bp Feature: domain Description: SHOCT Location: 451 3-4594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-UG27/RVT-GII/RVT-DGRs/RVT-CRISPR(RVT-UNC), TM2 (pfam05154), SHOCT (pfam09851)

Seq: JABSOS010000004.1 Candidatus Caenarcaniphilales bacterium isolate DT_14 DT-Caenarcaniphilales-1_scaffold_4, whole genome shotgun sequence (358477 bp)
Overview 1 RT 1: 85953-90604 bp 2 RT 2: 98631-103351 bp Neighborhood of RT #1 [85953, 90604] RVT-UG17 SLATT_5 Neighborhood of RT #2 [98631, 103351] Phage_integrase RVT-UNC Feature: gene Location: 85953-86867 bp Feature: gene Location: 87055-88029 bp Feature: gene Location: 88126-89532 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 88387-88999 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 88387-88999 bp Feature: gene Location: 89666-90295 bp Feature: domain Description: SLATT_5 Location: 89684-90269 bp Feature: domain Description: SLATT_5 Location: 89684-902 69 bp Feature: gene Location: 90341-90604 bp Feature: gene Location: 98631-99647 bp Feature: domain Description: Phage_integrase Location: 99111-99615 bp Feature: domain Description: Phage_integrase Location: 99111-99615 bp Feature: gene Location: 99680-100693 bp Feature: gene Location: 100732-101958 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 101053-101659 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 101053-101659 bp Feature: gene Location: 102075-102734 bp Feature: gene Location: 102797-103351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), Phage_integrase (pfam00589), RVT-GII/RVT-CRISPR/RVT-UG27(RVT-UNC)

Seq: JABSOS010000006.1 Candidatus Caenarcaniphilales bacterium isolate DT_14 DT-Caenarcaniphilales-1_scaffold_6, whole genome shotgun sequence (167738 bp)
Overview 1 RT 1: 46418-50867 bp Neighborhood of RT #1 [46418, 50867] RVT-GII Transposase_20 Feature: gene Location: 46418-47287 bp Feature: gene Location: 47510-47734 bp Feature: gene Location: 47727-49097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48033-48687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4803 3 -48687 bp Feature: gene Location: 49242-49775 bp Feature: domain Description: Transposase_20 Location: 49422-49665 bp Feature: domain Description: Transposase_20 Location: 49422-49665 bp Feature: gene Location: 50220-50867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Transposase_20 (pfam02371)