myRT

myRT report for GCA_013266925.1_ASM1326692v1

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Seq: JABRVJ010000171.1 Klebsiella variicola strain CRN 19 S19_contig_171, whole genome shotgun sequence (29005 bp)
Overview 1 RT 1: 5225-10271 bp Neighborhood of RT #1 [5225, 10447] proA RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 5225-6478 bp Feature: domain Description: proA Location: 5252-6443 bp Feature: domain Description: proA Location: 5252-6443 bp Feature: gene Location: 6574-6747 bp Feature: gene Location: 7119-8057 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7218-7815 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 721 8-781 5 bp Feature: gene Location: 8059-9687 bp Feature: domain Description: COG3950 Location: 8242-9415 bp Feature: domain Description: COG3950 Location: 8242-941 5 bp Feature: gene Location: 9671-10447 bp Feature: domain Description: TIGR02646 Location: 9743-10271 bp Feature: domain Description: TIGR02646 Location: 9743-1 0271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: JABRVJ010000244.1 Klebsiella variicola strain CRN 19 S19_contig_244, whole genome shotgun sequence (8950 bp)
Overview 1 RT 1: 79-2835 bp Neighborhood of RT #1 [79, 2840] RVT_N RVT-GII GIIM PRK09951 Colicin_im Feature: gene Location: 79-312 bp Feature: gene Location: 595-2088 bp Feature: RT Description: RVT_N Location: 640-883 bp Feature: RT Description: RVT_N Location: 640-883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 928-1576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 8-1576 bp Feature: domain Description: GIIM Note: maturase Location: 1636-1864 bp Feature: domain Description: GIIM Note: maturase Location: 1636-1864 bp Feature: gene Location: 2095-2319 bp Feature: domain Description: PRK09951 Location: 2173-2290 bp Feature: domain Description: PRK09951 Location: 2 173-2 2 90 bp Feature: gene Location: 2376-2840 bp Feature: domain Description: Colicin_im Location: 2490-2835 bp Feature: domain Description: Colicin_im Location: 2 490-2 835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), Colicin_im (pfam03857), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)