myRT

myRT report for GCA_013276335.1_ASM1327633v1

Download annotations/find similar RTs

Seq: VMKV01000104.1 Streptococcus sp. 2100 2100-15_S23_L001_R1_001_(paired)_contig_104, whole genome shotgun sequence (690 bp)
Overview 1 RT 1: 157-562 bp Neighborhood of RT #1 [157, 564] RVT-GII Feature: gene Location: 157-564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 166-562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 66-562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VMKV01000050.1 Streptococcus sp. 2100 2100-15_S23_L001_R1_001_(paired)_contig_50, whole genome shotgun sequence (16826 bp)
Overview 1 RT 1: 3-4768 bp Neighborhood of RT #1 [3, 4815] RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 3-611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: domain Description: GIIM Note: maturase Location: 207-420 bp Feature: domain Description: GIIM Note: maturase Location: 2 07-42 0 bp Feature: gene Location: 708-956 bp Feature: domain Description: INT_ICEBs1_C_like Location: 726-891 bp Feature: domain Description: INT_ICEBs1_C_like Location: 72 6-891 bp Feature: gene Location: 1516-4815 bp Feature: domain Description: rexB_recomb Location: 1546-4768 bp Feature: domain Description: rexB_recomb Location: 1546-4768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rexB_recomb (TIGR02774), RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189)

Seq: VMKV01000074.1 Streptococcus sp. 2100 2100-15_S23_L001_R1_001_(paired)_contig_74, whole genome shotgun sequence (6916 bp)
Overview 1 RT 1: 5733-6735 bp Neighborhood of RT #1 [5733, 6914] YqgV RVT-GII GIIM Feature: gene Location: 5733-6074 bp Feature: domain Description: YqgV Location: 5787-6069 bp Feature: domain Description: YqgV Location: 5787-6069 bp Feature: gene Location: 6077-6217 bp Feature: gene Location: 6318-6914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6321-6468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 21-6468 bp Feature: domain Description: GIIM Note: maturase Location: 6522-6735 bp Feature: domain Description: GIIM Note: maturase Location: 6522-673 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), RVT-GII, GIIM (pfam08388)