myRT

myRT report for GCA_013276405.1_ASM1327640v1

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Seq: VMKY01000107.1 Streptococcus sp. 1290 1290-15_S19_L001_R1_001_(paired)_contig_107, whole genome shotgun sequence (4931 bp)
Overview 1 RT 1: 1926-4799 bp Neighborhood of RT #1 [1926, 4810] SR_TndX_transposase PRK00106 RVT-GII Feature: gene Location: 1926-2141 bp Feature: domain Description: SR_TndX_transposase Location: 1929-2100 bp Feature: domain Description: SR_TndX_transposase Location: 1 929-21 00 bp Feature: gene Location: 2193-3806 bp Feature: domain Description: PRK00106 Location: 2202-3804 bp Feature: domain Description: PRK001 06 Location: 2202-3804 bp Feature: gene Location: 4508-4810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4712-4799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 2-4799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), PRK00106 (ribonuclease Y), RVT-GII

Seq: VMKY01000129.1 Streptococcus sp. 1290 1290-15_S19_L001_R1_001_(paired)_contig_129, whole genome shotgun sequence (7276 bp)
Overview 1 RT 1: 5954-7172 bp Neighborhood of RT #1 [5954, 7273] YqgV GIIM GIIM RVT-GII Feature: gene Location: 5954-6244 bp Feature: domain Description: YqgV Location: 5957-6239 bp Feature: domain Description: YqgV Location: 5957-62 39 bp Feature: gene Location: 6540-6809 bp Feature: domain Description: GIIM Note: maturase Location: 6546-6630 bp Feature: domain Description: GIIM Note: maturase Location: 6546-6630 bp Feature: domain Description: GIIM Note: maturase Location: 6672-6744 bp Feature: domain Description: GIIM Note: maturase Location: 6672 -6744 bp Feature: gene Location: 6881-7273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6890-7172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6890-7172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), GIIM (pfam08388), RVT-GII

Seq: VMKY01000153.1 Streptococcus sp. 1290 1290-15_S19_L001_R1_001_(paired)_contig_153, whole genome shotgun sequence (8643 bp)
Overview 1 RT 1: 1-4882 bp Neighborhood of RT #1 [1, 4929] RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 1-753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-295 bp Feature: domain Description: GIIM Note: maturase Location: 349-562 bp Feature: domain Description: GIIM Note: maturase Location: 3 49-562 bp Feature: gene Location: 837-1085 bp Feature: domain Description: INT_ICEBs1_C_like Location: 855-1020 bp Feature: domain Description: INT_ICEBs1_C_like Location: 855-1020 bp Feature: gene Location: 1630-4929 bp Feature: domain Description: rexB_recomb Location: 1660-4882 bp Feature: domain Description: rexB_recomb Location: 1660-4882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rexB_recomb (TIGR02774), RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189)