myRT

myRT report for GCA_013276435.1_ASM1327643v1

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Seq: VMLB01000106.1 Streptococcus sp. 6178 6178_S31_L001_R1_001_(paired)_contig_106, whole genome shotgun sequence (1407 bp)
Overview 1 RT 1: 2-1217 bp Neighborhood of RT #1 [2, 1228] RVT-GII RVT-GII Feature: gene Location: 2-457 bp Feature: gene Location: 547-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550-907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550-907 bp Feature: gene Location: 926-1228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1130-1217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 30-1 21 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VMLB01000005.1 Streptococcus sp. 6178 6178_S31_L001_R1_001_(paired)_contig_5, whole genome shotgun sequence (10931 bp)
Overview 1 RT 1: 3-4881 bp Neighborhood of RT #1 [3, 4928] RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 3-752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 -2 94 bp Feature: domain Description: GIIM Note: maturase Location: 348-561 bp Feature: domain Description: GIIM Note: maturase Location: 348-561 bp Feature: gene Location: 836-1084 bp Feature: domain Description: INT_ICEBs1_C_like Location: 854-1019 bp Feature: domain Description: INT_ICEBs1_C_like Location: 854-1019 bp Feature: gene Location: 1629-4928 bp Feature: domain Description: rexB_recomb Location: 1659-4881 bp Feature: domain Description: rexB_recomb Location: 1659-4881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rexB_recomb (TIGR02774), RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189)

Seq: VMLB01000069.1 Streptococcus sp. 6178 6178_S31_L001_R1_001_(paired)_contig_69, whole genome shotgun sequence (6885 bp)
Overview 1 RT 1: 5561-6704 bp Neighborhood of RT #1 [5561, 6883] YqgV RVT-GII GIIM Feature: gene Location: 5561-5902 bp Feature: domain Description: YqgV Location: 5615-5897 bp Feature: domain Description: YqgV Location: 5615-5897 bp Feature: gene Location: 5905-6045 bp Feature: gene Location: 6146-6883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6155-6437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6155-643 7 bp Feature: domain Description: GIIM Note: maturase Location: 6491-6704 bp Feature: domain Description: GIIM Note: maturase Location: 6491-6704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), RVT-GII, GIIM (pfam08388)