myRT

myRT report for GCA_013276805.1_ASM1327680v1

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Seq: VMLS01000049.1 Streptococcus sp. 1449 1449-09_S31_L001_R1_001_(paired)_contig_49, whole genome shotgun sequence (7772 bp)
Overview 1 RT 1: 5701-7454 bp Neighborhood of RT #1 [5701, 7465] YqgV RVT-GII GIIM RVT-GII Feature: gene Location: 5701-6042 bp Feature: domain Description: YqgV Location: 5755-6037 bp Feature: domain Description: YqgV Location: 5755-6037 bp Feature: gene Location: 6045-6185 bp Feature: gene Location: 6286-7146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6289-6700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6289-6700 bp Feature: domain Description: GIIM Note: maturase Location: 6754-6967 bp Feature: domain Description: GIIM Note: maturase Location: 6754-6967 bp Feature: gene Location: 7163-7465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7367-7454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7367-7454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), RVT-GII, GIIM (pfam08388)

Seq: VMLS01000055.1 Streptococcus sp. 1449 1449-09_S31_L001_R1_001_(paired)_contig_55, whole genome shotgun sequence (22251 bp)
Overview 1 RT 1: 226-3569 bp Neighborhood of RT #1 [226, 3610] RVT-GII RVT-GII PRK00106 SR_TndX_transposase Feature: gene Location: 226-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229-586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 9-586 bp Feature: gene Location: 605-907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 809-896 bp Feature: gene Location: 1610-3223 bp Feature: domain Description: PRK00106 Location: 1619-3221 bp Feature: domain Description: PRK00106 Location: 1619-32 2 1 bp Feature: gene Location: 3275-3610 bp Feature: domain Description: SR_TndX_transposase Location: 3314-3569 bp Feature: domain Description: SR_TndX_transposase Location: 3314-3569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00106 (ribonuclease Y), RVT-GII, SR_TndX_transposase (cd03770)

Seq: VMLS01000008.1 Streptococcus sp. 1449 1449-09_S31_L001_R1_001_(paired)_contig_8, whole genome shotgun sequence (47340 bp)
Overview 1 RT 1: 41665-47022 bp Neighborhood of RT #1 [41665, 47033] rexB_recomb INT_ICEBs1_C_like RVT-GII GIIM RVT-GII Feature: gene Location: 41665-44964 bp Feature: domain Description: rexB_recomb Location: 41695-44917 bp Feature: domain Description: rexB_recomb Location: 41695-44917 bp Feature: gene Location: 45510-45758 bp Feature: domain Description: INT_ICEBs1_C_like Location: 45528-45693 bp Feature: domain Description: INT_ICEBs1_C_like Location: 45528-45693 bp Feature: gene Location: 45842-46714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45845-46256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45845-46256 bp Feature: domain Description: GIIM Note: maturase Location: 46310-46523 bp Feature: domain Description: GIIM Note: maturase Location: 463 10-46523 bp Feature: gene Location: 46731-47033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46935-47022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4693 5-47022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rexB_recomb (TIGR02774), INT_ICEBs1_C_like (cd01189), RVT-GII, GIIM (pfam08388)