myRT

myRT report for GCA_013277055.1_ASM1327705v1

Download annotations/find similar RTs

Seq: VMME01000017.1 Streptococcus sp. 2877 2877-06_R1_(paired)_contig_17, whole genome shotgun sequence (590 bp)
Overview 1 RT 1: 288-579 bp Neighborhood of RT #1 [288, 590] RVT-GII Feature: gene Location: 288-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 492-579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 492-579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VMME01000078.1 Streptococcus sp. 2877 2877-06_R1_(paired)_contig_78, whole genome shotgun sequence (7077 bp)
Overview 1 RT 1: 3-1900 bp Neighborhood of RT #1 [3, 1905] RVT-GII GIIM YqgV TauC Feature: gene Location: 3-599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: domain Description: GIIM Note: maturase Location: 207-420 bp Feature: domain Description: GIIM Note: maturase Location: 2 07-42 0 bp Feature: gene Location: 843-1184 bp Feature: domain Description: YqgV Location: 897-1179 bp Feature: domain Description: YqgV Location: 897-1179 bp Feature: gene Location: 1165-1905 bp Feature: domain Description: TauC Location: 1177-1900 bp Feature: domain Description: TauC Location: 1177-1900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TauC (COG0600), RVT-GII, GIIM (pfam08388), YqgV (COG0011)

Seq: VMME01000081.1 Streptococcus sp. 2877 2877-06_R1_(paired)_contig_81, whole genome shotgun sequence (16865 bp)
Overview 1 RT 1: 3-4768 bp Neighborhood of RT #1 [3, 4815] RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 3-611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: domain Description: GIIM Note: maturase Location: 207-420 bp Feature: domain Description: GIIM Note: maturase Location: 207-420 bp Feature: gene Location: 708-956 bp Feature: domain Description: INT_ICEBs1_C_like Location: 726-891 bp Feature: domain Description: INT_ICEBs1_C_like Location: 726-891 bp Feature: gene Location: 1516-4815 bp Feature: domain Description: rexB_recomb Location: 1546-4768 bp Feature: domain Description: rexB_recomb Location: 1546-4768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rexB_recomb (TIGR02774), RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189)

Seq: VMME01000084.1 Streptococcus sp. 2877 2877-06_R1_(paired)_contig_84, whole genome shotgun sequence (1371 bp)
Overview 1 RT 1: 3-840 bp Neighborhood of RT #1 [3, 1343] RVT-GII RVT-GII HTH_29 Feature: gene Location: 3-155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57-144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57-14 4 bp Feature: gene Location: 172-534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175-532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175-532 bp Feature: gene Location: 624-1343 bp Feature: domain Description: HTH_29 Location: 669-840 bp Feature: domain Description: HTH_29 Location: 669-84 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_29 (pfam13551)