myRT

myRT report for GCA_013277075.1_ASM1327707v1

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Seq: VMMF01000010.1 Streptococcus sp. 959 959_S11_L001_R1_001_(paired)_contig_10, whole genome shotgun sequence (112776 bp)
Overview 1 RT 1: 23684-30087 bp Neighborhood of RT #1 [23684, 30092] PRK14830 RVT-UG5 COG3575 RuvB Feature: gene Location: 23684-24442 bp Feature: domain Description: PRK14830 Location: 23702-24440 bp Feature: domain Description: PRK1 4830 Location: 23702-24440 bp Feature: gene Location: 24682-25392 bp Feature: gene Location: 25385-28084 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 25859-26396 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 25859-26396 bp Feature: gene Location: 28541-29104 bp Feature: domain Description: COG3575 Location: 28547-29096 bp Feature: domain Description: COG3575 Location: 28547-29096 bp Feature: gene Location: 29094-30092 bp Feature: domain Description: RuvB Location: 29100-30087 bp Feature: domain Description: RuvB Location: 291 00-30087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14830 (undecaprenyl pyrophosphate synthase; Provisional), RVT-UG5, COG3575 (Uncharacterized protein ), RuvB (COG2255)

Seq: VMMF01000041.1 Streptococcus sp. 959 959_S11_L001_R1_001_(paired)_contig_41, whole genome shotgun sequence (5534 bp)
Overview 1 RT 1: 186-3585 bp Neighborhood of RT #1 [186, 3872] RVT-GII KOG4768 cas_Csn1 DEDD_Tnp_IS110 DEDD_Tnp_IS110 Feature: gene Location: 186-2108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513-1248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 513-12 48 bp Feature: domain Description: KOG4768 Location: 1395-1500 bp Feature: domain Description: KOG4768 Location: 1395-1500 bp Feature: domain Description: cas_Csn1 Location: 1659-1938 bp Feature: domain Description: cas_Csn1 Location: 1659-1938 bp Feature: gene Location: 3125-3406 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3152-3389 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3152 -3389 bp Feature: gene Location: 3381-3872 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3396-3585 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3396-3585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), DEDD_Tnp_IS110 (pfam01548)