myRT

myRT report for GCA_013277315.1_ASM1327731v1

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Seq: VMMS01000026.1 Streptococcus sp. 2106 2106_(paired)_contig_26, whole genome shotgun sequence (14961 bp)
Overview 1 RT 1: 13168-14647 bp Neighborhood of RT #1 [13168, 14658] HTH_29 RVT-GII RVT-GII Feature: gene Location: 13168-13701 bp Feature: domain Description: HTH_29 Location: 13213-13384 bp Feature: domain Description: HTH_29 Location: 1 321 3-1 3384 bp Feature: gene Location: 13702-13887 bp Feature: gene Location: 13977-14339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13980-14337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3980-1 4337 bp Feature: gene Location: 14356-14658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14560-14647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4560-1 4647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), RVT-GII

Seq: VMMS01000030.1 Streptococcus sp. 2106 2106_(paired)_contig_30, whole genome shotgun sequence (6934 bp)
Overview 1 RT 1: 1-2091 bp Neighborhood of RT #1 [1, 2096] RVT-GII GIIM YqgV TauC Feature: gene Location: 1-801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-343 bp Feature: domain Description: GIIM Note: maturase Location: 397-610 bp Feature: domain Description: GIIM Note: maturase Location: 397-610 bp Feature: gene Location: 1034-1375 bp Feature: domain Description: YqgV Location: 1088-1370 bp Feature: domain Description: YqgV Location: 1088-1370 bp Feature: gene Location: 1356-2096 bp Feature: domain Description: TauC Location: 1368-2091 bp Feature: domain Description: TauC Location: 1368-2 091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), TauC (COG0600), RVT-GII, GIIM (pfam08388)

Seq: VMMS01000031.1 Streptococcus sp. 2106 2106_(paired)_contig_31, whole genome shotgun sequence (8721 bp)
Overview 1 RT 1: 1-4960 bp Neighborhood of RT #1 [1, 5007] RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 1-792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-3 46 bp Feature: domain Description: GIIM Note: maturase Location: 400-613 bp Feature: domain Description: GIIM Note: maturase Location: 400-613 bp Feature: gene Location: 900-1148 bp Feature: domain Description: INT_ICEBs1_C_like Location: 918-1083 bp Feature: domain Description: INT_ICEBs1_C_like Location: 918-1083 bp Feature: gene Location: 1708-5007 bp Feature: domain Description: rexB_recomb Location: 1738-4960 bp Feature: domain Description: rexB_recomb Location: 173 8-4960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rexB_recomb (TIGR02774), RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189)

Seq: VMMS01000032.1 Streptococcus sp. 2106 2106_(paired)_contig_32, whole genome shotgun sequence (7171 bp)
Overview 1 RT 1: 1-2303 bp Neighborhood of RT #1 [1, 2305] RVT-GII GIIM QueFC Bsubt_queE Feature: gene Location: 1-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -4 03 bp Feature: domain Description: GIIM Note: maturase Location: 457-670 bp Feature: domain Description: GIIM Note: maturase Location: 4 57-670 bp Feature: gene Location: 1079-1570 bp Feature: domain Description: QueFC Location: 1091-1529 bp Feature: domain Description: QueFC Location: 1091-1529 bp Feature: gene Location: 1589-2305 bp Feature: domain Description: Bsubt_queE Location: 1613-2303 bp Feature: domain Description: Bsubt_queE Location: 1613-2303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT QueFC (COG0780), Bsubt_queE (TIGR03365), RVT-GII, GIIM (pfam08388)

Seq: VMMS01000092.1 Streptococcus sp. 2106 2106_(paired)_contig_92, whole genome shotgun sequence (31249 bp)
Overview 1 RT 1: 28031-31247 bp Neighborhood of RT #1 [28031, 31246] eno RVT-GII Feature: gene Location: 28031-28183 bp Feature: gene Location: 28619-29923 bp Feature: domain Description: eno Location: 28622-29915 bp Feature: domain Description: eno Location: 28622-29915 bp Feature: gene Location: 30719-31246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30923-31247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30923-31247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT eno (TIGR01060), RVT-GII