myRT

myRT report for GCA_013277355.1_ASM1327735v1

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Seq: VMMT01000013.1 Streptococcus sp. 1343 1343_S6_L001_R1_001_(paired)_contig_13, whole genome shotgun sequence (11458 bp)
Overview 1 RT 1: 79-5400 bp Neighborhood of RT #1 [79, 5447] RVT-GII RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 79-381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-370 bp Feature: gene Location: 398-1270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401 -81 2 bp Feature: domain Description: GIIM Note: maturase Location: 866-1079 bp Feature: domain Description: GIIM Note: maturase Location: 866-1 079 bp Feature: gene Location: 1354-1602 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1372-1537 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 372-1 537 bp Feature: gene Location: 2148-5447 bp Feature: domain Description: rexB_recomb Location: 2178-5400 bp Feature: domain Description: rexB_recomb Location: 21 78-5400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-GII, GIIM (pfam08388), rexB_recomb (TIGR02774)

Seq: VMMT01000006.1 Streptococcus sp. 1343 1343_S6_L001_R1_001_(paired)_contig_6, whole genome shotgun sequence (44319 bp)
Overview 1 RT 1: 316-2921 bp Neighborhood of RT #1 [316, 2921] RVT-GII GIIM phage_arpU Feature: gene Location: 316-1593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-1135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 0-1135 bp Feature: domain Description: GIIM Note: maturase Location: 1189-1402 bp Feature: domain Description: GIIM Note: maturase Location: 1189-1402 bp Feature: gene Location: 2154-2546 bp Feature: domain Description: phage_arpU Location: 2160-2511 bp Feature: domain Description: phage_arpU Location: 2 160-2 511 bp Feature: gene Location: 2673-2921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_arpU (TIGR01637), RVT-GII, GIIM (pfam08388)

Seq: VMMT01000007.1 Streptococcus sp. 1343 1343_S6_L001_R1_001_(paired)_contig_7, whole genome shotgun sequence (69537 bp)
Overview 1 RT 1: 671-2517 bp Neighborhood of RT #1 [671, 2522] RVT-GII GIIM GIIM YqgV Feature: gene Location: 671-1579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875-1490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875-1490 bp Feature: gene Location: 1667-1948 bp Feature: domain Description: GIIM Note: maturase Location: 1673-1757 bp Feature: domain Description: GIIM Note: maturase Location: 1673 -1757 bp Feature: domain Description: GIIM Note: maturase Location: 1799-1862 bp Feature: domain Description: GIIM Note: maturase Location: 1799-1862 bp Feature: gene Location: 2181-2522 bp Feature: domain Description: YqgV Location: 2235-2517 bp Feature: domain Description: YqgV Location: 223 5-2517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), YqgV (COG0011), RVT-GII

Seq: VMMT01000089.1 Streptococcus sp. 1343 1343_S6_L001_R1_001_(paired)_contig_89, whole genome shotgun sequence (1431 bp)
Overview 1 RT 1: 599-1278 bp Neighborhood of RT #1 [599, 1280] RVT-GII RVT-GII Feature: gene Location: 599-901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803-890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803-890 bp Feature: gene Location: 918-1280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921-1278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921-1278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII