myRT

myRT report for GCA_013277505.1_ASM1327750v1

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Seq: VMNC01000001.1 Streptococcus sp. k-378 k-378_(paired)_contig_1, whole genome shotgun sequence (10972 bp)
Overview 1 RT 1: 85-3978 bp Neighborhood of RT #1 [85, 3992] RVT-GII PRK00106 PRK13670 Feature: gene Location: 85-387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-376 bp Feature: gene Location: 1090-2703 bp Feature: domain Description: PRK00106 Location: 1099-2701 bp Feature: domain Description: PRK001 06 Location: 1 099-2701 bp Feature: gene Location: 2895-3992 bp Feature: domain Description: PRK13670 Location: 2898-3978 bp Feature: domain Description: PRK1 3670 Location: 2898-3978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00106 (ribonuclease Y), PRK13670 (nucleotidyltransferase), RVT-GII

Seq: VMNC01000137.1 Streptococcus sp. k-378 k-378_(paired)_contig_137, whole genome shotgun sequence (1651 bp)
Overview 1 RT 1: 2-1647 bp Neighborhood of RT #1 [2, 1649] DDE_3 RVT-GII GIIM Feature: gene Location: 2-331 bp Feature: domain Description: DDE_3 Location: 11-233 bp Feature: domain Description: DDE_3 Location: 11-2 33 bp Feature: gene Location: 621-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 825-1440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 5-1440 bp Feature: domain Description: GIIM Note: maturase Location: 1494-1647 bp Feature: domain Description: GIIM Note: maturase Location: 1494-1647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)

Seq: VMNC01000004.1 Streptococcus sp. k-378 k-378_(paired)_contig_4, whole genome shotgun sequence (7925 bp)
Overview 1 RT 1: 114-4211 bp Neighborhood of RT #1 [114, 4228] GIIM GIIM RVT-GII GIIM PRK14695 YgaE Feature: gene Location: 114-395 bp Feature: domain Description: GIIM Note: maturase Location: 120-204 bp Feature: domain Description: GIIM Note: maturase Location: 120-204 bp Feature: domain Description: GIIM Note: maturase Location: 246-309 bp Feature: domain Description: GIIM Note: maturase Location: 246-3 09 bp Feature: gene Location: 392-1390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 596-1211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 596-1211 bp Feature: domain Description: GIIM Note: maturase Location: 1265-1385 bp Feature: domain Description: GIIM Note: maturase Location: 1265-13 85 bp Feature: gene Location: 1987-3192 bp Feature: domain Description: PRK14695 Location: 2239-3190 bp Feature: domain Description: PRK14695 Location: 223 9-3 190 bp Feature: gene Location: 3260-4228 bp Feature: domain Description: YgaE Location: 3263-4211 bp Feature: domain Description: YgaE Location: 3 263 -4211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), PRK14695 (serine/threonine transporter SstT; Provisional), YgaE (COG4129), RVT-GII

Seq: VMNC01000086.1 Streptococcus sp. k-378 k-378_(paired)_contig_86, whole genome shotgun sequence (7207 bp)
Overview 1 RT 1: 3-2113 bp Neighborhood of RT #1 [3, 2118] RVT-GII GIIM YqgV TauC Feature: gene Location: 3-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-366 bp Feature: domain Description: GIIM Note: maturase Location: 420-633 bp Feature: domain Description: GIIM Note: maturase Location: 4 20-633 bp Feature: gene Location: 1056-1397 bp Feature: domain Description: YqgV Location: 1110-1392 bp Feature: domain Description: YqgV Location: 1110-1392 bp Feature: gene Location: 1378-2118 bp Feature: domain Description: TauC Location: 1390-2113 bp Feature: domain Description: TauC Location: 1390-2113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgV (COG0011), TauC (COG0600), RVT-GII, GIIM (pfam08388)