myRT

myRT report for GCA_013277735.1_ASM1327773v1

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Seq: JABBCS010000002.1 Photorhabdus heterorhabditis strain Q614 scaffold_0002, whole genome shotgun sequence (238312 bp)
Overview 1 RT 1: 184785-191902 bp Neighborhood of RT #1 [184785, 191907] Phage_GPA RVT-Retrons PflD Q P Feature: gene Location: 184785-186914 bp Feature: domain Description: Phage_GPA Location: 185190-186162 bp Feature: domain Description: Phage_GPA Location: 1 851 90-1 861 62 bp Feature: gene Location: 187332-187574 bp Feature: gene Location: 187886-188830 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 188024-188585 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 88024-1 88585 bp Feature: domain Description: PflD Location: 188633-188804 bp Feature: domain Description: PflD Location: 1 88633-1 88804 bp Feature: gene Location: 189116-190150 bp Feature: domain Description: Q Location: 189125-190142 bp Feature: domain Description: Q Location: 1 891 25-1 901 42 bp Feature: gene Location: 190150-191907 bp Feature: domain Description: P Location: 190168-191902 bp Feature: domain Description: P Location: 1 901 68-1 91 902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-Retrons, PflD (COG1882), Q (PHA02536), P (PHA02535)

Seq: JABBCS010000010.1 Photorhabdus heterorhabditis strain Q614 scaffold_0010, whole genome shotgun sequence (123054 bp)
Overview 1 RT 1: 80402-88670 bp Neighborhood of RT #1 [80402, 88672] DUF1837 BRR2 BRR2 RVT-GII Intron_maturas2 HNHc fghA_ester_D adh_III_F_hyde Feature: gene Location: 80402-81328 bp Feature: domain Description: DUF1837 Location: 80600-81293 bp Feature: domain Description: DUF1837 Location: 80600-812 93 bp Feature: gene Location: 81340-83820 bp Feature: domain Description: BRR2 Location: 81796-82111 bp Feature: domain Description: BRR2 Location: 81796-82 111 bp Feature: domain Description: BRR2 Location: 82498-82927 bp Feature: domain Description: BRR2 Location: 82 498-82 92 7 bp Feature: gene Location: 84603-86450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84741-85578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84741-85578 bp Feature: domain Description: Intron_maturas2 Location: 85755-85968 bp Feature: domain Description: Intron_maturas2 Location: 85755-85968 bp Feature: domain Description: HNHc Note: nucleases Location: 86139-86298 bp Feature: domain Description: HNHc Note: nucleases Location: 86139-862 98 bp Feature: gene Location: 86512-87345 bp Feature: domain Description: fghA_ester_D Location: 86521-87334 bp Feature: domain Description: fghA_ester_D Location: 8652 1-87334 bp Feature: gene Location: 87434-88672 bp Feature: domain Description: adh_III_F_hyde Location: 87569-88670 bp Feature: domain Description: adh_III_F_hyde Location: 87569-88670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), fghA_ester_D (TIGR02821), adh_III_F_hyde (TIGR02818)