myRT

myRT report for GCA_013277805.1_ASM1327780v1

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Seq: VBTN01000011.1 Pseudomonas sp. MS15a(2019) strain MS15 contig11, whole genome shotgun sequence (424433 bp)
Overview 1 RT 1: 67500-74508 bp Neighborhood of RT #1 [67500, 74552] PRK00220 PRK09604 RVT_N RVT-GII GIIM HNH RpsU dnaG Feature: gene Location: 67500-68174 bp Feature: domain Description: PRK00220 Location: 67608-68169 bp Feature: domain Description: PRK00220 Location: 67608-681 69 bp Feature: gene Location: 68220-69422 bp Feature: domain Description: PRK09604 Location: 68400-69414 bp Feature: domain Description: PRK09604 Location: 68400-6941 4 bp Feature: gene Location: 70410-72098 bp Feature: RT Description: RVT_N Location: 70467-70710 bp Feature: RT Description: RVT_N Location: 70467-7071 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70755-71391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70755-71 391 bp Feature: domain Description: GIIM Note: maturase Location: 71445-71676 bp Feature: domain Description: GIIM Note: maturase Location: 71 445-71 676 bp Feature: domain Description: HNH Note: nucleases Location: 71928-72066 bp Feature: domain Description: HNH Note: nucleases Location: 71 928-72066 bp Feature: gene Location: 72266-72481 bp Feature: domain Description: RpsU Location: 72269-72467 bp Feature: domain Description: RpsU Location: 72269-72467 bp Feature: gene Location: 72645-74552 bp Feature: domain Description: dnaG Location: 72654-74508 bp Feature: domain Description: dnaG Location: 72654-74508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00220 (glycerol-3-phosphate 1-O-acyltransferase PlsY), PRK09604 (tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), RpsU (COG0828), dnaG (TIGR01391)