myRT

myRT report for GCA_013281065.1_ASM1328106v1

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Seq: WCGF01000031.1 Lactobacillus helveticus strain IMAU30156 Scaffold31, whole genome shotgun sequence (21612 bp)
Overview 1 RT 1: 12642-15787 bp Neighborhood of RT #1 [12642, 15787] arb DUF3284 RVT-GII GIIM group_II_RT_mat Feature: gene Location: 12642-12863 bp Feature: domain Description: arb Location: 12645-12858 bp Feature: domain Description: arb Location: 1 2645-1 2858 bp Feature: gene Location: 12969-13379 bp Feature: domain Description: DUF3284 Location: 12981-13302 bp Feature: domain Description: DUF3284 Location: 1 2981 -1 3302 bp Feature: gene Location: 13684-14598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13729-14347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3729-1 4347 bp Feature: domain Description: GIIM Note: maturase Location: 14404-14593 bp Feature: domain Description: GIIM Note: maturase Location: 1 4404-1 4593 bp Feature: gene Location: 14595-14753 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 14628-14736 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 4628-1 4736 bp Feature: gene Location: 15353-15787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arb (PRK09593), DUF3284 (pfam11687), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: WCGF01000051.1 Lactobacillus helveticus strain IMAU30156 Scaffold51, whole genome shotgun sequence (12602 bp)
Overview 1 RT 1: 5142-10336 bp Neighborhood of RT #1 [5142, 10362] P-type_ATPase_HM_ZosA_PfeT-like P-type_ATPase_HM RVT-GII GIIM LysR PRK09564 Feature: gene Location: 5142-5354 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 5148-5286 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 5148-52 86 bp Feature: gene Location: 5357-7042 bp Feature: domain Description: P-type_ATPase_HM Location: 5420-7013 bp Feature: domain Description: P-type_ATPase_HM Location: 542 0-7013 bp Feature: gene Location: 7349-8119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7352-7640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7352 -7640 bp Feature: domain Description: GIIM Note: maturase Location: 7697-7904 bp Feature: domain Description: GIIM Note: maturase Location: 7697-7904 bp Feature: gene Location: 8171-8917 bp Feature: domain Description: LysR Location: 8174-8558 bp Feature: domain Description: LysR Location: 8174-8558 bp Feature: gene Location: 8998-10362 bp Feature: domain Description: PRK09564 Location: 9013-10336 bp Feature: domain Description: PRK09564 Location: 9013-10336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P-type_ATPase_HM_ZosA_PfeT-like (cd07551), P-type_ATPase_HM (cd07553), RVT-GII, GIIM (pfam08388), LysR (COG0583), PRK09564 (coenzyme A disulfide reductase; Reviewed)