myRT

myRT report for GCA_013281975.1_ASM1328197v1

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Seq: BLRZ01000005.1 Candidatus Hakubanella thermoalkaliphilus S34 DNA, HKBW3S34_000000000005, whole genome shotgun sequence (36991 bp)
Overview 1 RT 1: 2-2398 bp Neighborhood of RT #1 [2, 2406] RVT-GII GIIM adk PRK05716 Feature: gene Location: 2-760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-383 bp Feature: domain Description: GIIM Note: maturase Location: 455-674 bp Feature: domain Description: GIIM Note: maturase Location: 455-674 bp Feature: gene Location: 998-1660 bp Feature: domain Description: adk Location: 1016-1652 bp Feature: domain Description: adk Location: 1 01 6-1 652 bp Feature: gene Location: 1711-2406 bp Feature: domain Description: PRK05716 Location: 1714-2398 bp Feature: domain Description: PRK0571 6 Location: 1 71 4-2398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), adk (TIGR01351), PRK05716 (methionine aminopeptidase; Validated)

Seq: BLRZ01000028.1 Candidatus Hakubanella thermoalkaliphilus S34 DNA, HKBW3S34_000000000028, whole genome shotgun sequence (18339 bp)
Overview 1 RT 1: 14823-17923 bp Neighborhood of RT #1 [14823, 17997] nusA nusA RimP RVT-CRISPR Csx1_III-U Feature: gene Location: 14823-15245 bp Feature: domain Description: nusA Location: 14826-15012 bp Feature: domain Description: nusA Location: 1482 6-15012 bp Feature: domain Description: nusA Location: 15015-15243 bp Feature: domain Description: nusA Location: 15015-152 43 bp Feature: gene Location: 15260-15721 bp Feature: domain Description: RimP Location: 15272-15716 bp Feature: domain Description: RimP Location: 152 72 -15716 bp Feature: gene Location: 15802-16314 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 16036-16270 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 16036-162 70 bp Feature: gene Location: 16495-17997 bp Feature: domain Description: Csx1_III-U Location: 16711-17923 bp Feature: domain Description: Csx1_III-U Location: 16711-1792 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nusA (PRK12329), RimP (COG0779), RVT-CRISPR, Csx1_III-U (cl21570)

Seq: BLRZ01000066.1 Candidatus Hakubanella thermoalkaliphilus S34 DNA, HKBW3S34_000000000066, whole genome shotgun sequence (11014 bp)
Overview 1 RT 1: 8892-10827 bp Neighborhood of RT #1 [8892, 10904] RVT-GII GIIM Feature: gene Location: 8892-9023 bp Feature: gene Location: 9116-9250 bp Feature: gene Location: 9609-10904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9903-10536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9903 -1053 6 bp Feature: domain Description: GIIM Note: maturase Location: 10611-10827 bp Feature: domain Description: GIIM Note: maturase Location: 10611-10827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BLRZ01000199.1 Candidatus Hakubanella thermoalkaliphilus S34 DNA, HKBW3S34_000000000199, whole genome shotgun sequence (2150 bp)
Overview 1 RT 1: 268-2019 bp Neighborhood of RT #1 [268, 2019] RVT-GII RVT-GII Feature: gene Location: 268-1146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-775 bp Feature: gene Location: 1131-1601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1407-1557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 07-1557 bp Feature: gene Location: 1876-2019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BLRZ01000278.1 Candidatus Hakubanella thermoalkaliphilus S34 DNA, HKBW3S34_000000000278, whole genome shotgun sequence (1131 bp)
Overview 1 RT 1: 1-1130 bp Neighborhood of RT #1 [1, 1130] RVT-GII Feature: gene Location: 1-318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-316 bp Feature: gene Location: 816-1130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII