myRT

myRT report for GCA_013284265.1_ASM1328426v1

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Seq: JABTBR010000001.1 Oxalobacteraceae bacterium strain BJB404, whole genome shotgun sequence (362717 bp)
Overview 1 RT 1: 311042-314884 bp Neighborhood of RT #1 [311042, 314898] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 311042-312361 bp Feature: gene Location: 312495-312707 bp Feature: gene Location: 312727-314169 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 313246-313933 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 3246-31 3933 bp Feature: gene Location: 314130-314489 bp Feature: domain Description: Avd_like Location: 314157-314463 bp Feature: domain Description: Avd_like Location: 31 41 57-31 4463 bp Feature: gene Location: 314518-314898 bp Feature: domain Description: DUF1566 Location: 314704-314884 bp Feature: domain Description: DUF1 566 Location: 31 4704-31 4884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: JABTBR010000006.1 Oxalobacteraceae bacterium strain BJB404, whole genome shotgun sequence (172726 bp)
Overview 1 RT 1: 654-8266 bp Neighborhood of RT #1 [654, 8289] TolB tolB TolB TolB PD40 PD40 RVT_N RVT-GII TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 654-1061 bp Feature: gene Location: 1590-3461 bp Feature: domain Description: TolB Location: 1704-2025 bp Feature: domain Description: TolB Location: 1704-2 02 5 bp Feature: domain Description: tolB Location: 2079-2127 bp Feature: domain Description: tolB Location: 2 079-2 12 7 bp Feature: domain Description: TolB Location: 2196-2451 bp Feature: domain Description: TolB Location: 2 196-2 451 bp Feature: domain Description: TolB Location: 2835-3093 bp Feature: domain Description: TolB Location: 2 835-3093 bp Feature: domain Description: PD40 Location: 3114-3186 bp Feature: domain Description: PD40 Location: 3114-3186 bp Feature: domain Description: PD40 Location: 3210-3303 bp Feature: domain Description: PD40 Location: 32 10-3303 bp Feature: gene Location: 4942-6036 bp Feature: RT Description: RVT_N Location: 4972-5215 bp Feature: RT Description: RVT_N Location: 4972 -52 15 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5260-5896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 60-5896 bp Feature: gene Location: 6376-6588 bp Feature: domain Description: TnpB_IS66 Location: 6397-6586 bp Feature: domain Description: TnpB_IS66 Location: 6397-6586 bp Feature: gene Location: 6769-8289 bp Feature: domain Description: LZ_Tnp_IS66 Location: 6892-7096 bp Feature: domain Description: LZ_Tnp_IS66 Location: 6892 -7096 bp Feature: domain Description: zf-IS66 Location: 7120-7249 bp Feature: domain Description: zf-IS66 Location: 712 0-72 49 bp Feature: domain Description: DDE_Tnp_IS66 Location: 7294-8137 bp Feature: domain Description: DDE_Tnp_IS66 Location: 72 94-8137 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8158-8266 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8158-82 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TolB (COG0823), tolB (PRK05137), PD40 (pfam07676), RVT_N (pfam13655), RVT-GII, TnpB_IS66 (pfam05717)