myRT

myRT report for GCA_013284915.1_ASM1328491v1

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Seq: JABTBY010000017.1 Pseudomonas aeruginosa strain 163603 16-3603_ctg_17, whole genome shotgun sequence (156854 bp)
Overview 1 RT 1: 84468-94774 bp Neighborhood of RT #1 [84468, 94776] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 84468-85589 bp Feature: domain Description: COG3177 Location: 84486-85578 bp Feature: domain Description: COG31 77 Location: 84486-85578 bp Feature: gene Location: 85848-85985 bp Feature: gene Location: 86313-87998 bp Feature: RT Description: RVT_N Location: 86370-86610 bp Feature: RT Description: RVT_N Location: 86370-8661 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86658-87294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86658-87294 bp Feature: domain Description: GIIM Note: maturase Location: 87348-87579 bp Feature: domain Description: GIIM Note: maturase Location: 87348-87579 bp Feature: domain Description: HNH Note: nucleases Location: 87831-87969 bp Feature: domain Description: HNH Note: nucleases Location: 87831 -87969 bp Feature: gene Location: 89079-92816 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 89187-89844 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 891 87-89844 bp Feature: domain Description: PRK09776 Location: 90057-90528 bp Feature: domain Description: PRK09776 Location: 90057-90528 bp Feature: domain Description: PAS Location: 90600-91110 bp Feature: domain Description: PAS Location: 90600-91 1 1 0 bp Feature: domain Description: PRK10060 Location: 91119-92766 bp Feature: domain Description: PRK1 0060 Location: 91 1 1 9-92766 bp Feature: gene Location: 92923-94776 bp Feature: domain Description: PRK05658 Location: 92935-94774 bp Feature: domain Description: PRK05658 Location: 92935-94774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)