myRT

myRT report for GCA_013284945.1_ASM1328494v1

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Seq: JABTBX010000005.1 Pseudomonas aeruginosa strain 152609 15-2609_ctg_5, whole genome shotgun sequence (290436 bp)
Overview 1 RT 1: 83864-94161 bp Neighborhood of RT #1 [83864, 94172] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 83864-85717 bp Feature: domain Description: PRK05658 Location: 83876-85715 bp Feature: domain Description: PRK05658 Location: 83876-8571 5 bp Feature: gene Location: 85824-89561 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85932-86589 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 85932-86589 bp Feature: domain Description: PRK09776 Location: 86802-87273 bp Feature: domain Description: PRK09776 Location: 86802-87273 bp Feature: domain Description: PAS Location: 87345-87855 bp Feature: domain Description: PAS Location: 87345-87855 bp Feature: domain Description: PRK10060 Location: 87864-89511 bp Feature: domain Description: PRK1 0060 Location: 87864-8951 1 bp Feature: gene Location: 90642-92327 bp Feature: RT Description: RVT_N Location: 90699-90939 bp Feature: RT Description: RVT_N Location: 90699-90939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90987-91623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90987-91 623 bp Feature: domain Description: GIIM Note: maturase Location: 91677-91908 bp Feature: domain Description: GIIM Note: maturase Location: 91 677-91 908 bp Feature: domain Description: HNH Note: nucleases Location: 92160-92298 bp Feature: domain Description: HNH Note: nucleases Location: 921 60-92298 bp Feature: gene Location: 92655-92792 bp Feature: gene Location: 93051-94172 bp Feature: domain Description: COG3177 Location: 93069-94161 bp Feature: domain Description: COG31 77 Location: 93069-941 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )