myRT

myRT report for GCA_013285765.1_ASM1328576v1

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Seq: JABDHC010000020.1 Verrucomicrobia bacterium isolate BWOrgControl_Nextera12_MAG6 3300021033.a:Ga0206804_10054, whole genome shotgun sequence (33495 bp)
Overview 1 RT 1: 5204-15756 bp Neighborhood of RT #1 [5204, 16199] RVT-GII GIIM RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat Rhs_assc_core Caps_synth Feature: gene Location: 5204-5347 bp Feature: gene Location: 5665-6051 bp Feature: gene Location: 6521-8011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7013-7655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 701 3-7655 bp Feature: domain Description: GIIM Note: maturase Location: 7724-7949 bp Feature: domain Description: GIIM Note: maturase Location: 7724-7949 bp Feature: gene Location: 8803-14937 bp Feature: domain Description: RHS_repeat Location: 11299-11389 bp Feature: domain Description: RHS_repeat Location: 1 1 299-1 1 389 bp Feature: domain Description: RHS_repeat Location: 11425-11521 bp Feature: domain Description: RHS_repeat Location: 1 1 425-1 1 521 bp Feature: domain Description: RHS_repeat Location: 11626-11707 bp Feature: domain Description: RHS_repeat Location: 1 1 626-1 1 707 bp Feature: domain Description: RHS_repeat Location: 11746-11806 bp Feature: domain Description: RHS_repeat Location: 1 1 746-1 1 806 bp Feature: domain Description: RHS_repeat Location: 11866-11956 bp Feature: domain Description: RHS_repeat Location: 1 1 866-1 1 956 bp Feature: domain Description: RHS_repeat Location: 12502-12613 bp Feature: domain Description: RHS_repeat Location: 1 2502-1 261 3 bp Feature: domain Description: RHS_repeat Location: 12709-12808 bp Feature: domain Description: RHS_repeat Location: 1 2709-1 2808 bp Feature: domain Description: RHS_repeat Location: 12901-13006 bp Feature: domain Description: RHS_repeat Location: 1 2901 -1 3006 bp Feature: domain Description: RHS_repeat Location: 13099-13207 bp Feature: domain Description: RHS_repeat Location: 1 3099-1 3207 bp Feature: domain Description: RHS_repeat Location: 13483-13600 bp Feature: domain Description: RHS_repeat Location: 1 3483-1 3600 bp Feature: domain Description: Rhs_assc_core Location: 14059-14284 bp Feature: domain Description: Rhs_assc_core Location: 1 4059-1 4284 bp Feature: gene Location: 15378-16199 bp Feature: domain Description: Caps_synth Location: 15450-15756 bp Feature: domain Description: Caps_synth Location: 1 5450-1 5756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RHS_repeat (pfam05593), Rhs_assc_core (TIGR03696), Caps_synth (pfam05704)

Seq: JABDHC010000094.1 Verrucomicrobia bacterium isolate BWOrgControl_Nextera12_MAG6 3300021033.a:Ga0206804_10214, whole genome shotgun sequence (16412 bp)
Overview 1 RT 1: 4764-8424 bp Neighborhood of RT #1 [4764, 8489] RVT-GII GIIM PDZ_serine_protease TetR_C_7 Feature: gene Location: 4764-4997 bp Feature: gene Location: 5060-5506 bp Feature: gene Location: 5647-6927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5878-6496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5878-6496 bp Feature: domain Description: GIIM Note: maturase Location: 6547-6763 bp Feature: domain Description: GIIM Note: maturase Location: 6547-6763 bp Feature: gene Location: 7029-7601 bp Feature: domain Description: PDZ_serine_protease Location: 7110-7362 bp Feature: domain Description: PDZ_serine_protease Location: 7110-7362 bp Feature: gene Location: 8031-8489 bp Feature: domain Description: TetR_C_7 Location: 8250-8424 bp Feature: domain Description: TetR_C_7 Location: 82 50-842 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PDZ_serine_protease (cd00987), TetR_C_7 (pfam14246)

Seq: JABDHC010000280.1 Verrucomicrobia bacterium isolate BWOrgControl_Nextera12_MAG6 3300021033.a:Ga0206804_10622, whole genome shotgun sequence (4990 bp)
Overview 1 RT 1: 111-2700 bp Neighborhood of RT #1 [111, 2700] RVT-UG7 Feature: gene Location: 111-1538 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 546-948 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 546-948 bp Feature: gene Location: 1566-2477 bp Feature: gene Location: 2569-2700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7