myRT

myRT report for GCA_013285865.1_ASM1328586v1

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Seq: JABDGX010000021.1 Gammaproteobacteria bacterium isolate BWOrgControl_Nextera76_MAG5 3300021026.a:Ga0206868_10081, whole genome shotgun sequence (29480 bp)
Overview 1 RT 1: 26285-29323 bp Neighborhood of RT #1 [26285, 29478] VirD2 DUF3363 RVT-UG18 Feature: gene Location: 26285-27829 bp Feature: domain Description: VirD2 Location: 26447-27368 bp Feature: domain Description: VirD2 Location: 26447-27368 bp Feature: domain Description: DUF3363 Location: 27590-27728 bp Feature: domain Description: DUF3363 Location: 27590-27728 bp Feature: gene Location: 27834-28283 bp Feature: gene Location: 28501-29478 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 28747-29323 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 28747-29323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD2 (COG3843), DUF3363 (pfam11843), RVT-UG18

Seq: JABDGX010000075.1 Gammaproteobacteria bacterium isolate BWOrgControl_Nextera76_MAG5 3300021026.a:Ga0206868_10342, whole genome shotgun sequence (9826 bp)
Overview 1 RT 1: 6540-9825 bp Neighborhood of RT #1 [6540, 9825] RVT-UG18 Feature: gene Location: 6540-6770 bp Feature: gene Location: 6827-8143 bp Feature: gene Location: 8723-9643 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 8945-9524 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 8945-952 4 bp Feature: gene Location: 9661-9825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18

Seq: JABDGX010000126.1 Gammaproteobacteria bacterium isolate BWOrgControl_Nextera76_MAG5 3300021026.a:Ga0206868_10580, whole genome shotgun sequence (5224 bp)
Overview 1 RT 1: 49-3078 bp Neighborhood of RT #1 [49, 3119] RVT-GII GIIM YhhI DUF3050 Feature: gene Location: 49-357 bp Feature: gene Location: 513-1763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 717-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 717-13 74 bp Feature: domain Description: GIIM Note: maturase Location: 1455-1671 bp Feature: domain Description: GIIM Note: maturase Location: 1455-1671 bp Feature: gene Location: 1821-2060 bp Feature: domain Description: YhhI Location: 1839-1977 bp Feature: domain Description: YhhI Location: 183 9-1977 bp Feature: gene Location: 2325-3119 bp Feature: domain Description: DUF3050 Location: 2382-3078 bp Feature: domain Description: DUF3 050 Location: 23 82-3 078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433), DUF3050 (pfam11251)

Seq: JABDGX010000143.1 Gammaproteobacteria bacterium isolate BWOrgControl_Nextera76_MAG5 3300021026.a:Ga0206868_10709, whole genome shotgun sequence (3825 bp)
Overview 1 RT 1: 1-3647 bp Neighborhood of RT #1 [1, 3709] RVT-GII GIIM RVT-UG18 COG3547 Feature: gene Location: 1-555 bp Feature: gene Location: 1046-2299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1250-1907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1250-1907 bp Feature: domain Description: GIIM Note: maturase Location: 1988-2204 bp Feature: domain Description: GIIM Note: maturase Location: 1988-2204 bp Feature: gene Location: 2784-3263 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2796-3228 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2796-3228 bp Feature: gene Location: 3287-3709 bp Feature: domain Description: COG3547 Location: 3299-3647 bp Feature: domain Description: COG354 7 Location: 3299-364 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT-UG18, COG3547 (Transposase )