myRT

myRT report for GCA_013287235.1_ASM1328723v1

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Seq: JABDEF010000016.1 Gammaproteobacteria bacterium isolate BWMinHeated_Nextera23_MAG9 3300020913.a:Ga0207091_1078, whole genome shotgun sequence (24033 bp)
Overview 1 RT 1: 3969-6470 bp Neighborhood of RT #1 [3969, 6496] HigA RVT_N RVT-GII GIIM DDE_Tnp_Tn3 DDE_Tnp_Tn3 Feature: gene Location: 3969-4391 bp Feature: domain Description: HigA Location: 4053-4389 bp Feature: domain Description: HigA Location: 4053-4389 bp Feature: gene Location: 4432-4749 bp Feature: gene Location: 4796-6094 bp Feature: domain Description: RVT_N Location: 4802-4895 bp Feature: domain Description: RVT_N Location: 4802-4895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4940-5570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4940-5570 bp Feature: domain Description: GIIM Note: maturase Location: 5624-5855 bp Feature: domain Description: GIIM Note: maturase Location: 5624-5855 bp Feature: gene Location: 6097-6354 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6106-6244 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 61 06-6244 bp Feature: gene Location: 6359-6496 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6362-6470 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6362-6470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigA (COG5499), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526)

Seq: JABDEF010000034.1 Gammaproteobacteria bacterium isolate BWMinHeated_Nextera23_MAG9 3300020913.a:Ga0207091_1186, whole genome shotgun sequence (14226 bp)
Overview 1 RT 1: 5723-12729 bp Neighborhood of RT #1 [5723, 12755] DUF4158 DDE_Tnp_Tn3 RVT-UG18 LysR Feature: gene Location: 5723-8734 bp Feature: domain Description: DUF4158 Location: 5738-6221 bp Feature: domain Description: DUF4158 Location: 5738-62 2 1 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 7502-8663 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 7502 -8663 bp Feature: gene Location: 8848-9882 bp Feature: gene Location: 9945-11141 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 10143-10725 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 10143-1072 5 bp Feature: gene Location: 11407-11544 bp Feature: gene Location: 11859-12755 bp Feature: domain Description: LysR Location: 11865-12729 bp Feature: domain Description: LysR Location: 11865-12 72 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), RVT-UG18, LysR (COG0583)