myRT

myRT report for GCA_013287815.1_ASM1328781v1

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Seq: JABDDC010000011.1 Chlamydiae bacterium isolate BWMinControl_Nextera34_MAG1 3300020853.a:Ga0207010_1024, whole genome shotgun sequence (42332 bp)
Overview 1 RT 1: 24014-29716 bp Neighborhood of RT #1 [24014, 29781] DDE_Tnp_IS66 zf-IS66 RVT-GII HepA COG4279 HTH_XRE Feature: gene Location: 24014-24394 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24083-24260 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24083-24260 bp Feature: gene Location: 24378-24743 bp Feature: domain Description: zf-IS66 Location: 24423-24564 bp Feature: domain Description: zf-IS66 Location: 24423-24564 bp Feature: gene Location: 24833-25759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25163-25733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 63-25733 bp Feature: gene Location: 26060-28777 bp Feature: domain Description: HepA Location: 26996-28724 bp Feature: domain Description: HepA Location: 26996-28724 bp Feature: gene Location: 28792-29781 bp Feature: domain Description: COG4279 Location: 28921-29587 bp Feature: domain Description: COG4279 Location: 28921 -29587 bp Feature: domain Description: HTH_XRE Location: 29620-29716 bp Feature: domain Description: HTH_XRE Location: 29620-2971 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), zf-IS66 (pfam13005), RVT-GII, HepA (COG0553), COG4279 (Uncharacterized conserved protein, contains Zn finger domain ), HTH_XRE (smart00530)

Seq: JABDDC010000056.1 Chlamydiae bacterium isolate BWMinControl_Nextera34_MAG1 3300020853.a:Ga0207010_1134, whole genome shotgun sequence (9630 bp)
Overview 1 RT 1: 1-5046 bp Neighborhood of RT #1 [1, 5819] RVT-GII RVT-GII GIIM DUF2608 Feature: gene Location: 1-243 bp Feature: gene Location: 747-1331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-132 9 bp Feature: gene Location: 1352-1987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1358-1607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1358-1607 bp Feature: domain Description: GIIM Note: maturase Location: 1691-1910 bp Feature: domain Description: GIIM Note: maturase Location: 1691-1910 bp Feature: gene Location: 2424-4079 bp Feature: gene Location: 4248-5819 bp Feature: domain Description: DUF2608 Location: 4329-5046 bp Feature: domain Description: DUF2 608 Location: 432 9-5046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF2608 (pfam11019)

Seq: JABDDC010000063.1 Chlamydiae bacterium isolate BWMinControl_Nextera34_MAG1 3300020853.a:Ga0207010_1147, whole genome shotgun sequence (8540 bp)
Overview 1 RT 1: 3545-7898 bp Neighborhood of RT #1 [3545, 8116] COG2865 RVT-GII RVT-GII GT28_Beta-DGS-like Feature: gene Location: 3545-4885 bp Feature: domain Description: COG2865 Location: 3566-4850 bp Feature: domain Description: COG2865 Location: 3 566-4850 bp Feature: gene Location: 5011-5340 bp Feature: gene Location: 5799-6194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5829-6018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5829-6018 bp Feature: gene Location: 6237-6764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6651-6762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6651-6762 bp Feature: gene Location: 6964-7095 bp Feature: gene Location: 7355-8116 bp Feature: domain Description: GT28_Beta-DGS-like Location: 7370-7898 bp Feature: domain Description: GT28_Beta-DGS-like Location: 73 70-7898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-GII, GT28_Beta-DGS-like (cd17507)

Seq: JABDDC010000083.1 Chlamydiae bacterium isolate BWMinControl_Nextera34_MAG1 3300020853.a:Ga0207010_1211, whole genome shotgun sequence (5601 bp)
Overview 1 RT 1: 2586-5011 bp Neighborhood of RT #1 [2586, 5250] CCC1_like RVT-DGRs Feature: gene Location: 2586-3344 bp Feature: domain Description: CCC1_like Location: 2874-3321 bp Feature: domain Description: CCC1_like Location: 2874 -3321 bp Feature: gene Location: 3580-4674 bp Feature: gene Location: 4816-5250 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4840-5011 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 84 0-5011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CCC1_like (cl00278), RVT-DGRs

Seq: JABDDC010000119.1 Chlamydiae bacterium isolate BWMinControl_Nextera34_MAG1 3300020853.a:Ga0207010_1385, whole genome shotgun sequence (2507 bp)
Overview 1 RT 1: 2-2506 bp Neighborhood of RT #1 [2, 2506] GT_2_like_d RVT-GII GIIM Feature: gene Location: 2-139 bp Feature: gene Location: 150-968 bp Feature: domain Description: GT_2_like_d Location: 240-777 bp Feature: domain Description: GT_2_like_d Location: 240-777 bp Feature: gene Location: 1220-1747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1229-1304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1229-1304 bp Feature: domain Description: GIIM Note: maturase Location: 1355-1568 bp Feature: domain Description: GIIM Note: maturase Location: 135 5 -15 68 bp Feature: gene Location: 1793-2041 bp Feature: gene Location: 2324-2506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GT_2_like_d (cd04196)