myRT

myRT report for GCA_013288655.1_ASM1328865v1

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Seq: JABDBK010000003.1 Gammaproteobacteria bacterium isolate BWMinControl_Nextera52_MAG3 3300020766.a:Ga0207028_1006, whole genome shotgun sequence (82862 bp)
Overview 1 RT 1: 63308-67329 bp Neighborhood of RT #1 [63308, 67577] PRK13837 REC RVT-GII GIIM PRK13724 PRK13724 Feature: gene Location: 63308-64327 bp Feature: domain Description: PRK13837 Location: 63527-64298 bp Feature: domain Description: PRK1 3837 Location: 63527-64298 bp Feature: gene Location: 64305-64676 bp Feature: domain Description: REC Location: 64320-64662 bp Feature: domain Description: REC Location: 64320-64662 bp Feature: gene Location: 64826-66067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65021-65678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65021 -65678 bp Feature: domain Description: GIIM Note: maturase Location: 65759-65978 bp Feature: domain Description: GIIM Note: maturase Location: 65759-65978 bp Feature: gene Location: 66118-66357 bp Feature: gene Location: 66783-67577 bp Feature: domain Description: PRK13724 Location: 66930-67038 bp Feature: domain Description: PRK1 3724 Location: 66930-67038 bp Feature: domain Description: PRK13724 Location: 67221-67329 bp Feature: domain Description: PRK1 3724 Location: 67221 -67329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13837 (two-component system VirA-like sensor kinase), REC (smart00448), RVT-GII, GIIM (pfam08388), PRK13724 (conjugal transfer protein TrbD; Provisional)

Seq: JABDBK010000026.1 Gammaproteobacteria bacterium isolate BWMinControl_Nextera52_MAG3 3300020766.a:Ga0207028_1065, whole genome shotgun sequence (25297 bp)
Overview 1 RT 1: 4069-15235 bp Neighborhood of RT #1 [4069, 15315] YjbI RVT-GII DUF4158 DDE_Tnp_Tn3 PinE RVT-GII GIIM C5-epim_C Feature: gene Location: 4069-4974 bp Feature: domain Description: YjbI Location: 4267-4909 bp Feature: domain Description: YjbI Location: 42 67-4909 bp Feature: gene Location: 4980-5147 bp Feature: gene Location: 5226-5855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5433-5817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5433-5817 bp Feature: gene Location: 5857-8904 bp Feature: domain Description: DUF4158 Location: 5884-6376 bp Feature: domain Description: DUF4158 Location: 5884-6376 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 7636-8812 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 7636-8812 bp Feature: gene Location: 8947-9540 bp Feature: domain Description: PinE Location: 8950-9502 bp Feature: domain Description: PinE Location: 8950-9502 bp Feature: gene Location: 9757-10254 bp Feature: gene Location: 10463-11077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10469-10688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10469-10688 bp Feature: domain Description: GIIM Note: maturase Location: 10772-10991 bp Feature: domain Description: GIIM Note: maturase Location: 10772 -10991 bp Feature: gene Location: 11257-14085 bp Feature: gene Location: 14323-15315 bp Feature: domain Description: C5-epim_C Location: 14710-15235 bp Feature: domain Description: C5-epim_C Location: 14710-152 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbI (COG2346), RVT-GII, DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526), PinE (COG1961), GIIM (pfam08388), C5-epim_C (pfam06662)

Seq: JABDBK010000040.1 Gammaproteobacteria bacterium isolate BWMinControl_Nextera52_MAG3 3300020766.a:Ga0207028_1126, whole genome shotgun sequence (16921 bp)
Overview 1 RT 1: 11372-16920 bp Neighborhood of RT #1 [11372, 16920] PP-binding FAAL PRK08633 GSH_gloB RVT-UG18 Feature: gene Location: 11372-14179 bp Feature: domain Description: PP-binding Location: 11432-11618 bp Feature: domain Description: PP-binding Location: 1143 2-11618 bp Feature: domain Description: FAAL Location: 11747-13346 bp Feature: domain Description: FAAL Location: 11747-13 3 46 bp Feature: domain Description: PRK08633 Location: 13469-13979 bp Feature: domain Description: PRK0863 3 Location: 13 469-13 979 bp Feature: gene Location: 14227-15012 bp Feature: domain Description: GSH_gloB Location: 14251-14977 bp Feature: domain Description: GSH_gloB Location: 14251-14977 bp Feature: gene Location: 15423-16343 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 15645-16227 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 15645-16227 bp Feature: gene Location: 16603-16920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PP-binding (pfam00550), FAAL (cd05931), PRK08633 (2-acyl-glycerophospho-ethanolamine acyltransferase; Validated), GSH_gloB (TIGR03413), RVT-UG18

Seq: JABDBK010000064.1 Gammaproteobacteria bacterium isolate BWMinControl_Nextera52_MAG3 3300020766.a:Ga0207028_1274, whole genome shotgun sequence (7592 bp)
Overview 1 RT 1: 5357-7502 bp Neighborhood of RT #1 [5357, 7591] DUF2384 RVT-GII GIIM Feature: gene Location: 5357-6244 bp Feature: gene Location: 6248-6676 bp Feature: domain Description: DUF2384 Location: 6515-6647 bp Feature: domain Description: DUF2384 Location: 6515-664 7 bp Feature: gene Location: 6836-7591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6842-7202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 684 2-7202 bp Feature: domain Description: GIIM Note: maturase Location: 7283-7502 bp Feature: domain Description: GIIM Note: maturase Location: 7283-7502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2384 (pfam09722), RVT-GII, GIIM (pfam08388)