myRT

myRT report for GCA_013288955.1_ASM1328895v1

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Seq: JABDAX010000005.1 Planctomycetes bacterium isolate BWOrgControl_Nextera58_MAG1 3300020671.a:Ga0206850_10005, whole genome shotgun sequence (93592 bp)
Overview 1 RT 1: 2-2869 bp 2 RT 2: 45343-51656 bp Neighborhood of RT #1 [2, 2883] RVT-Retrons KOG3923 PTPS Neighborhood of RT #2 [45343, 51656] PQQ_3 PQQ_3 PQQ_3 PQQ PQQ_3 PQQ_3 FGE-sulfatase RVT-Retrons HEAT_2 HEAT HEAT_2 Aldo_ket_red Feature: gene Location: 2-1222 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 371-992 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 371 -992 bp Feature: gene Location: 1229-2353 bp Feature: domain Description: KOG3923 Location: 1265-2339 bp Feature: domain Description: KOG3923 Location: 1 265-2339 bp Feature: gene Location: 2389-2883 bp Feature: domain Description: PTPS Location: 2434-2869 bp Feature: domain Description: PTPS Location: 2434-2869 bp Feature: gene Location: 45343-46674 bp Feature: domain Description: PQQ_3 Location: 45514-45583 bp Feature: domain Description: PQQ_3 Location: 4551 4-45583 bp Feature: domain Description: PQQ_3 Location: 45718-45862 bp Feature: domain Description: PQQ_3 Location: 4571 8-45862 bp Feature: domain Description: PQQ_3 Location: 45871-46018 bp Feature: domain Description: PQQ_3 Location: 45871 -4601 8 bp Feature: domain Description: PQQ Location: 46108-46168 bp Feature: domain Description: PQQ Location: 461 08-461 68 bp Feature: domain Description: PQQ_3 Location: 46303-46423 bp Feature: domain Description: PQQ_3 Location: 46303-46423 bp Feature: domain Description: PQQ_3 Location: 46471-46534 bp Feature: domain Description: PQQ_3 Location: 46471 -46534 bp Feature: gene Location: 46718-47683 bp Feature: domain Description: FGE-sulfatase Location: 46994-47654 bp Feature: domain Description: FGE-sulfatase Location: 46994-47654 bp Feature: gene Location: 47680-49224 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48310-48934 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4831 0-48934 bp Feature: gene Location: 49286-51448 bp Feature: domain Description: HEAT_2 Location: 49442-49706 bp Feature: domain Description: HEAT_2 Location: 49442-49706 bp Feature: domain Description: HEAT Location: 49742-49796 bp Feature: domain Description: HEAT Location: 49742-49796 bp Feature: domain Description: HEAT_2 Location: 49967-50180 bp Feature: domain Description: HEAT_2 Location: 49967-501 80 bp Feature: domain Description: Aldo_ket_red Location: 50828-51380 bp Feature: domain Description: Aldo_ket_red Location: 50828-51 380 bp Feature: gene Location: 51486-51656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3923 (KOG3923, D-aspartate oxidase ), RVT-Retrons, PTPS (pfam01242), PQQ_3 (pfam13570), PQQ (smart00564), FGE-sulfatase (pfam03781), HEAT_2 (pfam13646), HEAT (sd00044), Aldo_ket_red (pfam00248)

Seq: JABDAX010000230.1 Planctomycetes bacterium isolate BWOrgControl_Nextera58_MAG1 3300020671.a:Ga0206850_10474, whole genome shotgun sequence (6703 bp)
Overview 1 RT 1: 1-3942 bp Neighborhood of RT #1 [1, 4223] RVT-GII PinE Zn_ribbon_recom Recombinase Feature: gene Location: 1-1317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 277-970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 77-970 bp Feature: gene Location: 1411-1677 bp Feature: gene Location: 2055-4223 bp Feature: domain Description: PinE Location: 2193-2760 bp Feature: domain Description: PinE Location: 2 193-2 760 bp Feature: domain Description: Zn_ribbon_recom Location: 3123-3291 bp Feature: domain Description: Zn_ribbon_recom Location: 312 3-32 91 bp Feature: domain Description: Recombinase Location: 3816-3942 bp Feature: domain Description: Recombinase Location: 3816-3942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), Recombinase (pfam07508)

Seq: JABDAX010000375.1 Planctomycetes bacterium isolate BWOrgControl_Nextera58_MAG1 3300020671.a:Ga0206850_10780, whole genome shotgun sequence (3355 bp)
Overview 1 RT 1: 1776-2880 bp Neighborhood of RT #1 [1776, 3353] RVT-CRISPR-like Feature: gene Location: 1776-1919 bp Feature: gene Location: 2143-2415 bp Feature: gene Location: 2469-3353 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2496-2880 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2496-2880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR