myRT

myRT report for GCA_013294205.1_ASM1329420v1

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Seq: JABTBM010000002.1 Clostridium beijerinckii strain DJ124 Ga0423204_02, whole genome shotgun sequence (6399759 bp)
Overview 1 RT 1: 349164-356955 bp 2 RT 2: 4164905-4170845 bp Neighborhood of RT #1 [349164, 356969] sensory_box PAS_9 sensory_box SpoIIE DUF1848 RVT-UG25 DUF1848 Neighborhood of RT #2 [4164905, 4170856] PucR WrbA RVT-GII GIIM Recombinase Zn_ribbon_recom Resolvase Feature: gene Location: 349164-350987 bp Feature: domain Description: sensory_box Location: 349227-349596 bp Feature: domain Description: sensory_box Location: 349227-349596 bp Feature: domain Description: PAS_9 Location: 349629-349917 bp Feature: domain Description: PAS_9 Location: 349629-34991 7 bp Feature: domain Description: sensory_box Location: 349950-350298 bp Feature: domain Description: sensory_box Location: 349950-350298 bp Feature: domain Description: SpoIIE Location: 350457-350982 bp Feature: domain Description: SpoIIE Location: 350457-350982 bp Feature: gene Location: 351777-352295 bp Feature: domain Description: DUF1848 Location: 351882-352266 bp Feature: domain Description: DUF1 848 Location: 351 882-352266 bp Feature: gene Location: 352480-355311 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 353785-354196 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 353785-3541 96 bp Feature: gene Location: 355425-355787 bp Feature: gene Location: 356088-356969 bp Feature: domain Description: DUF1848 Location: 356145-356955 bp Feature: domain Description: DUF1 848 Location: 3561 45-356955 bp Feature: gene Location: 4164905-4166479 bp Feature: domain Description: PucR Location: 4166012-4166435 bp Feature: domain Description: PucR Location: 41 6601 2-41 66435 bp Feature: gene Location: 4166503-4167081 bp Feature: domain Description: WrbA Location: 4166521-4166881 bp Feature: domain Description: WrbA Location: 41 66521 -41 66881 bp Feature: gene Location: 4167534-4168949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4167891-4168509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 67891 -41 68509 bp Feature: domain Description: GIIM Note: maturase Location: 4168560-4168788 bp Feature: domain Description: GIIM Note: maturase Location: 41 68560-41 68788 bp Feature: gene Location: 4169799-4170488 bp Feature: domain Description: Recombinase Location: 4169940-4170258 bp Feature: domain Description: Recombinase Location: 41 69940-41 70258 bp Feature: domain Description: Zn_ribbon_recom Location: 4170306-4170420 bp Feature: domain Description: Zn_ribbon_recom Location: 41 70306-41 70420 bp Feature: gene Location: 4170560-4170856 bp Feature: domain Description: Resolvase Location: 4170572-4170845 bp Feature: domain Description: Resolvase Location: 41 70572-41 70845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sensory_box (TIGR00229), PAS_9 (pfam13426), SpoIIE (pfam07228), DUF1848 (pfam08902), RVT-UG25, PucR (pfam07905), WrbA (COG0655), RVT-GII, GIIM (pfam08388), Recombinase (pfam07508)
Zn_ribbon_recom (pfam13408), Resolvase (smart00857)